RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
RPL39-202ENST00000468844 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
RPL39-202ENST00000468844 MT1EP04732 61 aa6.42□□□□□ -1.38
RPL39-202ENST00000468844 LUZP6Q538Z0 58 aa6.4□□□□□ -1.39
RPL39-202ENST00000468844 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
RPL39-202ENST00000468844 MT1LQ93083 61 aa6.25□□□□□ -1.41
RPL39-202ENST00000468844 LCE1AQ5T7P2 110 aa6.25□□□□□ -1.41
RPL39-202ENST00000468844 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
RPL39-202ENST00000468844 SPRR2EP22531 72 aa6.22□□□□□ -1.41
RPL39-202ENST00000468844 SPRR2BP35325 72 aa6.22□□□□□ -1.41
RPL39-202ENST00000468844 SPRR2AP35326 72 aa6.22□□□□□ -1.41
RPL39-202ENST00000468844 NEBP20929 6669 aa6.21□□□□□ -1.42
RPL39-202ENST00000468844 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
RPL39-202ENST00000468844 MT1GP13640 62 aa6.13□□□□□ -1.43
RPL39-202ENST00000468844 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
RPL39-202ENST00000468844 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
RPL39-202ENST00000468844 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
RPL39-202ENST00000468844 MT1MQ8N339 61 aa6.07□□□□□ -1.44
RPL39-202ENST00000468844 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
RPL39-202ENST00000468844 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
RPL39-202ENST00000468844 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
RPL39-202ENST00000468844 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
RPL39-202ENST00000468844 SPRR2DP22532 72 aa5.99□□□□□ -1.45
RPL39-202ENST00000468844 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
RPL39-202ENST00000468844 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
RPL39-202ENST00000468844 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
RPL39-202ENST00000468844 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
RPL39-202ENST00000468844 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
RPL39-202ENST00000468844 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
RPL39-202ENST00000468844 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
RPL39-202ENST00000468844 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
RPL39-202ENST00000468844 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
RPL39-202ENST00000468844 INE1O15225 51 aa5.49□□□□□ -1.53
RPL39-202ENST00000468844 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
RPL39-202ENST00000468844 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
RPL39-202ENST00000468844 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
RPL39-202ENST00000468844 MT1AP04731 61 aa5.31□□□□□ -1.56
RPL39-202ENST00000468844 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
RPL39-202ENST00000468844 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
RPL39-202ENST00000468844 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
RPL39-202ENST00000468844 MT4P47944 62 aa5.23□□□□□ -1.57
RPL39-202ENST00000468844 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
RPL39-202ENST00000468844 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
RPL39-202ENST00000468844 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
RPL39-202ENST00000468844 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
RPL39-202ENST00000468844 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
RPL39-202ENST00000468844 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
RPL39-202ENST00000468844 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.62
RPL39-202ENST00000468844 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
RPL39-202ENST00000468844 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
RPL39-202ENST00000468844 MT3P25713 68 aa4.81□□□□□ -1.64
RPL39-202ENST00000468844 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
RPL39-202ENST00000468844 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
RPL39-202ENST00000468844 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
RPL39-202ENST00000468844 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
RPL39-202ENST00000468844 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.69
RPL39-202ENST00000468844 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
RPL39-202ENST00000468844 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
RPL39-202ENST00000468844 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
RPL39-202ENST00000468844 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
RPL39-202ENST00000468844 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
RPL39-202ENST00000468844 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
RPL39-202ENST00000468844 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
RPL39-202ENST00000468844 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
RPL39-202ENST00000468844 PRM1P04553 51 aa4.07□□□□□ -1.76
RPL39-202ENST00000468844 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
RPL39-202ENST00000468844 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
RPL39-202ENST00000468844 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
RPL39-202ENST00000468844 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
RPL39-202ENST00000468844 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
RPL39-202ENST00000468844 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
RPL39-202ENST00000468844 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
RPL39-202ENST00000468844 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
RPL39-202ENST00000468844 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
RPL39-202ENST00000468844 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
RPL39-202ENST00000468844 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
RPL39-202ENST00000468844 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
RPL39-202ENST00000468844 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms