RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
NPHP4-206ENST00000468253 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
NPHP4-206ENST00000468253 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
NPHP4-206ENST00000468253 MT1GP13640 62 aa7.23□□□□□ -1.25
NPHP4-206ENST00000468253 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
NPHP4-206ENST00000468253 MT1LQ93083 61 aa7.14□□□□□ -1.27
NPHP4-206ENST00000468253 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
NPHP4-206ENST00000468253 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
NPHP4-206ENST00000468253 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
NPHP4-206ENST00000468253 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
NPHP4-206ENST00000468253 MT1MQ8N339 61 aa7.04□□□□□ -1.28
NPHP4-206ENST00000468253 ROMO1P60602 79 aa6.95□□□□□ -1.3
NPHP4-206ENST00000468253 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
NPHP4-206ENST00000468253 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
NPHP4-206ENST00000468253 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
NPHP4-206ENST00000468253 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
NPHP4-206ENST00000468253 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
NPHP4-206ENST00000468253 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
NPHP4-206ENST00000468253 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
NPHP4-206ENST00000468253 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
NPHP4-206ENST00000468253 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
NPHP4-206ENST00000468253 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
NPHP4-206ENST00000468253 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
NPHP4-206ENST00000468253 MT4P47944 62 aa6.46□□□□□ -1.38
NPHP4-206ENST00000468253 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
NPHP4-206ENST00000468253 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
NPHP4-206ENST00000468253 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
NPHP4-206ENST00000468253 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
NPHP4-206ENST00000468253 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
NPHP4-206ENST00000468253 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
NPHP4-206ENST00000468253 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
NPHP4-206ENST00000468253 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
NPHP4-206ENST00000468253 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
NPHP4-206ENST00000468253 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.43
NPHP4-206ENST00000468253 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
NPHP4-206ENST00000468253 MT1AP04731 61 aa6.09□□□□□ -1.43
NPHP4-206ENST00000468253 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
NPHP4-206ENST00000468253 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
NPHP4-206ENST00000468253 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
NPHP4-206ENST00000468253 KRTAP5-10Q6L8G5 202 aa5.95□□□□□ -1.46
NPHP4-206ENST00000468253 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
NPHP4-206ENST00000468253 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
NPHP4-206ENST00000468253 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
NPHP4-206ENST00000468253 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
NPHP4-206ENST00000468253 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
NPHP4-206ENST00000468253 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
NPHP4-206ENST00000468253 MT3P25713 68 aa5.6□□□□□ -1.51
NPHP4-206ENST00000468253 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
NPHP4-206ENST00000468253 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
NPHP4-206ENST00000468253 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
NPHP4-206ENST00000468253 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
NPHP4-206ENST00000468253 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
NPHP4-206ENST00000468253 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
NPHP4-206ENST00000468253 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
NPHP4-206ENST00000468253 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
NPHP4-206ENST00000468253 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
NPHP4-206ENST00000468253 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
NPHP4-206ENST00000468253 LUZP6Q538Z0 58 aa5□□□□□ -1.61
NPHP4-206ENST00000468253 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
NPHP4-206ENST00000468253 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
NPHP4-206ENST00000468253 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
NPHP4-206ENST00000468253 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
NPHP4-206ENST00000468253 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
NPHP4-206ENST00000468253 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
NPHP4-206ENST00000468253 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
NPHP4-206ENST00000468253 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
NPHP4-206ENST00000468253 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
NPHP4-206ENST00000468253 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
NPHP4-206ENST00000468253 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
NPHP4-206ENST00000468253 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
NPHP4-206ENST00000468253 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
NPHP4-206ENST00000468253 PRM1P04553 51 aa3.52□□□□□ -1.85
NPHP4-206ENST00000468253 INE1O15225 51 aa3.48□□□□□ -1.85
NPHP4-206ENST00000468253 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
NPHP4-206ENST00000468253 H3BS24 57 aa3.34□□□□□ -1.87
NPHP4-206ENST00000468253 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
NPHP4-206ENST00000468253 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
NPHP4-206ENST00000468253 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms