RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
YBX1-204ENST00000467957 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
YBX1-204ENST00000467957 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
YBX1-204ENST00000467957 MT1GP13640 62 aa6.73□□□□□ -1.33
YBX1-204ENST00000467957 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
YBX1-204ENST00000467957 MT1LQ93083 61 aa6.65□□□□□ -1.34
YBX1-204ENST00000467957 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
YBX1-204ENST00000467957 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
YBX1-204ENST00000467957 MT1MQ8N339 61 aa6.59□□□□□ -1.35
YBX1-204ENST00000467957 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
YBX1-204ENST00000467957 ROMO1P60602 79 aa6.52□□□□□ -1.37
YBX1-204ENST00000467957 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
YBX1-204ENST00000467957 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
YBX1-204ENST00000467957 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
YBX1-204ENST00000467957 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
YBX1-204ENST00000467957 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
YBX1-204ENST00000467957 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
YBX1-204ENST00000467957 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
YBX1-204ENST00000467957 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
YBX1-204ENST00000467957 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
YBX1-204ENST00000467957 MT4P47944 62 aa6.18□□□□□ -1.42
YBX1-204ENST00000467957 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
YBX1-204ENST00000467957 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
YBX1-204ENST00000467957 PRO0628Q9UI54 55 aa6.11□□□□□ -1.43
YBX1-204ENST00000467957 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
YBX1-204ENST00000467957 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
YBX1-204ENST00000467957 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
YBX1-204ENST00000467957 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
YBX1-204ENST00000467957 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
YBX1-204ENST00000467957 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
YBX1-204ENST00000467957 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
YBX1-204ENST00000467957 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
YBX1-204ENST00000467957 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
YBX1-204ENST00000467957 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
YBX1-204ENST00000467957 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
YBX1-204ENST00000467957 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
YBX1-204ENST00000467957 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
YBX1-204ENST00000467957 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
YBX1-204ENST00000467957 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
YBX1-204ENST00000467957 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
YBX1-204ENST00000467957 MT1AP04731 61 aa5.67□□□□□ -1.5
YBX1-204ENST00000467957 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
YBX1-204ENST00000467957 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
YBX1-204ENST00000467957 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
YBX1-204ENST00000467957 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
YBX1-204ENST00000467957 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
YBX1-204ENST00000467957 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
YBX1-204ENST00000467957 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
YBX1-204ENST00000467957 MT3P25713 68 aa5.18□□□□□ -1.58
YBX1-204ENST00000467957 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
YBX1-204ENST00000467957 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
YBX1-204ENST00000467957 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
YBX1-204ENST00000467957 H3BS24 57 aa4.88□□□□□ -1.63
YBX1-204ENST00000467957 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
YBX1-204ENST00000467957 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
YBX1-204ENST00000467957 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
YBX1-204ENST00000467957 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
YBX1-204ENST00000467957 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
YBX1-204ENST00000467957 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
YBX1-204ENST00000467957 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
YBX1-204ENST00000467957 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
YBX1-204ENST00000467957 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
YBX1-204ENST00000467957 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
YBX1-204ENST00000467957 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
YBX1-204ENST00000467957 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
YBX1-204ENST00000467957 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
YBX1-204ENST00000467957 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
YBX1-204ENST00000467957 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
YBX1-204ENST00000467957 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
YBX1-204ENST00000467957 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
YBX1-204ENST00000467957 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
YBX1-204ENST00000467957 INE1O15225 51 aa3.58□□□□□ -1.84
YBX1-204ENST00000467957 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
YBX1-204ENST00000467957 PRM1P04553 51 aa3.35□□□□□ -1.87
YBX1-204ENST00000467957 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
YBX1-204ENST00000467957 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
YBX1-204ENST00000467957 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
YBX1-204ENST00000467957 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms