RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
SSBP1-206ENST00000467681 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
SSBP1-206ENST00000467681 MDN1Q9NU22 5596 aa5.17□□□□□ -1.58
SSBP1-206ENST00000467681 TNP1P09430 55 aa5.12□□□□□ -1.59
SSBP1-206ENST00000467681 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
SSBP1-206ENST00000467681 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SSBP1-206ENST00000467681 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
SSBP1-206ENST00000467681 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
SSBP1-206ENST00000467681 K7ERS5 55 aa5.07□□□□□ -1.6
SSBP1-206ENST00000467681 A6NED7 52 aa5.05□□□□□ -1.6
SSBP1-206ENST00000467681 MT1EP04732 61 aa5.05□□□□□ -1.6
SSBP1-206ENST00000467681 SPRR2DP22532 72 aa5.03□□□□□ -1.6
SSBP1-206ENST00000467681 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
SSBP1-206ENST00000467681 LCE3AQ5TA76 89 aa5□□□□□ -1.61
SSBP1-206ENST00000467681 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
SSBP1-206ENST00000467681 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
SSBP1-206ENST00000467681 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SSBP1-206ENST00000467681 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
SSBP1-206ENST00000467681 MT1GP13640 62 aa4.89□□□□□ -1.63
SSBP1-206ENST00000467681 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
SSBP1-206ENST00000467681 MT1LQ93083 61 aa4.86□□□□□ -1.63
SSBP1-206ENST00000467681 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SSBP1-206ENST00000467681 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
SSBP1-206ENST00000467681 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
SSBP1-206ENST00000467681 ROMO1P60602 79 aa4.78□□□□□ -1.64
SSBP1-206ENST00000467681 MT1MQ8N339 61 aa4.78□□□□□ -1.64
SSBP1-206ENST00000467681 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
SSBP1-206ENST00000467681 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
SSBP1-206ENST00000467681 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
SSBP1-206ENST00000467681 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
SSBP1-206ENST00000467681 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SSBP1-206ENST00000467681 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
SSBP1-206ENST00000467681 MT4P47944 62 aa4.38□□□□□ -1.71
SSBP1-206ENST00000467681 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
SSBP1-206ENST00000467681 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
SSBP1-206ENST00000467681 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SSBP1-206ENST00000467681 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
SSBP1-206ENST00000467681 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SSBP1-206ENST00000467681 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
SSBP1-206ENST00000467681 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.73
SSBP1-206ENST00000467681 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SSBP1-206ENST00000467681 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
SSBP1-206ENST00000467681 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
SSBP1-206ENST00000467681 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
SSBP1-206ENST00000467681 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
SSBP1-206ENST00000467681 MT1AP04731 61 aa4.14□□□□□ -1.75
SSBP1-206ENST00000467681 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SSBP1-206ENST00000467681 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
SSBP1-206ENST00000467681 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
SSBP1-206ENST00000467681 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
SSBP1-206ENST00000467681 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
SSBP1-206ENST00000467681 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
SSBP1-206ENST00000467681 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
SSBP1-206ENST00000467681 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SSBP1-206ENST00000467681 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
SSBP1-206ENST00000467681 MT3P25713 68 aa3.79□□□□□ -1.8
SSBP1-206ENST00000467681 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
SSBP1-206ENST00000467681 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
SSBP1-206ENST00000467681 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
SSBP1-206ENST00000467681 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SSBP1-206ENST00000467681 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SSBP1-206ENST00000467681 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
SSBP1-206ENST00000467681 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
SSBP1-206ENST00000467681 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
SSBP1-206ENST00000467681 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
SSBP1-206ENST00000467681 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
SSBP1-206ENST00000467681 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SSBP1-206ENST00000467681 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SSBP1-206ENST00000467681 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
SSBP1-206ENST00000467681 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
SSBP1-206ENST00000467681 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SSBP1-206ENST00000467681 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SSBP1-206ENST00000467681 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SSBP1-206ENST00000467681 PRM1P04553 51 aa2.44□□□□□ -2.02
SSBP1-206ENST00000467681 INE1O15225 51 aa2.42□□□□□ -2.02
SSBP1-206ENST00000467681 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SSBP1-206ENST00000467681 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
SSBP1-206ENST00000467681 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 76.7 ms