RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
PTPRE-206ENST00000467366 KRTAP3-1Q9BYR8 98 aa2.91□□□□□ -1.94
PTPRE-206ENST00000467366 M0QZ58 72 aa2.87□□□□□ -1.95
PTPRE-206ENST00000467366 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
PTPRE-206ENST00000467366 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
PTPRE-206ENST00000467366 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
PTPRE-206ENST00000467366 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
PTPRE-206ENST00000467366 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
PTPRE-206ENST00000467366 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
PTPRE-206ENST00000467366 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
PTPRE-206ENST00000467366 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
PTPRE-206ENST00000467366 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
PTPRE-206ENST00000467366 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
PTPRE-206ENST00000467366 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
PTPRE-206ENST00000467366 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
PTPRE-206ENST00000467366 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
PTPRE-206ENST00000467366 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
PTPRE-206ENST00000467366 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
PTPRE-206ENST00000467366 MT4P47944 62 aa2.64□□□□□ -1.99
PTPRE-206ENST00000467366 MT1XP80297 61 aa2.64□□□□□ -1.99
PTPRE-206ENST00000467366 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
PTPRE-206ENST00000467366 KRTAP4-6Q9BYQ5 205 aa2.63□□□□□ -1.99
PTPRE-206ENST00000467366 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
PTPRE-206ENST00000467366 TNP1P09430 55 aa2.58□□□□□ -2
PTPRE-206ENST00000467366 LCE4AQ5TA78 99 aa2.57□□□□□ -2
PTPRE-206ENST00000467366 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
PTPRE-206ENST00000467366 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
PTPRE-206ENST00000467366 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
PTPRE-206ENST00000467366 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
PTPRE-206ENST00000467366 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
PTPRE-206ENST00000467366 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
PTPRE-206ENST00000467366 MT1EP04732 61 aa2.37□□□□□ -2.03
PTPRE-206ENST00000467366 MT3P25713 68 aa2.37□□□□□ -2.03
PTPRE-206ENST00000467366 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
PTPRE-206ENST00000467366 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
PTPRE-206ENST00000467366 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
PTPRE-206ENST00000467366 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
PTPRE-206ENST00000467366 MT1GP13640 62 aa2.32□□□□□ -2.04
PTPRE-206ENST00000467366 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
PTPRE-206ENST00000467366 MT1MQ8N339 61 aa2.29□□□□□ -2.04
PTPRE-206ENST00000467366 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
PTPRE-206ENST00000467366 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
PTPRE-206ENST00000467366 KRTAP4-11Q9BYQ6 195 aa2.26□□□□□ -2.05
PTPRE-206ENST00000467366 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
PTPRE-206ENST00000467366 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
PTPRE-206ENST00000467366 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
PTPRE-206ENST00000467366 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
PTPRE-206ENST00000467366 MT1LQ93083 61 aa2.18□□□□□ -2.06
PTPRE-206ENST00000467366 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
PTPRE-206ENST00000467366 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
PTPRE-206ENST00000467366 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
PTPRE-206ENST00000467366 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
PTPRE-206ENST00000467366 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
PTPRE-206ENST00000467366 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
PTPRE-206ENST00000467366 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
PTPRE-206ENST00000467366 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
PTPRE-206ENST00000467366 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
PTPRE-206ENST00000467366 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
PTPRE-206ENST00000467366 LCE1EQ5T753 118 aa2□□□□□ -2.09
PTPRE-206ENST00000467366 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
PTPRE-206ENST00000467366 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
PTPRE-206ENST00000467366 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
PTPRE-206ENST00000467366 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
PTPRE-206ENST00000467366 MT1AP04731 61 aa1.84□□□□□ -2.11
PTPRE-206ENST00000467366 PRM1P04553 51 aa1.82□□□□□ -2.12
PTPRE-206ENST00000467366 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
PTPRE-206ENST00000467366 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
PTPRE-206ENST00000467366 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
PTPRE-206ENST00000467366 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PTPRE-206ENST00000467366 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
PTPRE-206ENST00000467366 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PTPRE-206ENST00000467366 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
PTPRE-206ENST00000467366 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
PTPRE-206ENST00000467366 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
PTPRE-206ENST00000467366 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
PTPRE-206ENST00000467366 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
PTPRE-206ENST00000467366 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
PTPRE-206ENST00000467366 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 75.8 ms