RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 Q1T7F1 81 aa6.95□□□□□ -1.3
GMDS-203ENST00000467288 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
GMDS-203ENST00000467288 MT1LQ93083 61 aa6.92□□□□□ -1.3
GMDS-203ENST00000467288 UQCR11O14957 56 aa6.89□□□□□ -1.31
GMDS-203ENST00000467288 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
GMDS-203ENST00000467288 MT1MQ8N339 61 aa6.89□□□□□ -1.31
GMDS-203ENST00000467288 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
GMDS-203ENST00000467288 MT4P47944 62 aa6.78□□□□□ -1.32
GMDS-203ENST00000467288 PSPHP1O15172 72 aa6.77□□□□□ -1.33
GMDS-203ENST00000467288 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
GMDS-203ENST00000467288 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
GMDS-203ENST00000467288 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
GMDS-203ENST00000467288 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
GMDS-203ENST00000467288 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
GMDS-203ENST00000467288 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
GMDS-203ENST00000467288 A6NED7 52 aa6.6□□□□□ -1.35
GMDS-203ENST00000467288 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
GMDS-203ENST00000467288 K7ERS5 55 aa6.58□□□□□ -1.36
GMDS-203ENST00000467288 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
GMDS-203ENST00000467288 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
GMDS-203ENST00000467288 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
GMDS-203ENST00000467288 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
GMDS-203ENST00000467288 BRK1Q8WUW1 75 aa6.43□□□□□ -1.38
GMDS-203ENST00000467288 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
GMDS-203ENST00000467288 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
GMDS-203ENST00000467288 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
GMDS-203ENST00000467288 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
GMDS-203ENST00000467288 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
GMDS-203ENST00000467288 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
GMDS-203ENST00000467288 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
GMDS-203ENST00000467288 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
GMDS-203ENST00000467288 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
GMDS-203ENST00000467288 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
GMDS-203ENST00000467288 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
GMDS-203ENST00000467288 ROMO1P60602 79 aa6.16□□□□□ -1.42
GMDS-203ENST00000467288 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
GMDS-203ENST00000467288 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
GMDS-203ENST00000467288 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
GMDS-203ENST00000467288 MT1AP04731 61 aa5.9□□□□□ -1.46
GMDS-203ENST00000467288 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
GMDS-203ENST00000467288 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
GMDS-203ENST00000467288 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
GMDS-203ENST00000467288 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
GMDS-203ENST00000467288 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
GMDS-203ENST00000467288 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
GMDS-203ENST00000467288 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
GMDS-203ENST00000467288 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
GMDS-203ENST00000467288 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
GMDS-203ENST00000467288 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
GMDS-203ENST00000467288 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
GMDS-203ENST00000467288 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
GMDS-203ENST00000467288 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.53
GMDS-203ENST00000467288 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
GMDS-203ENST00000467288 MT3P25713 68 aa5.39□□□□□ -1.55
GMDS-203ENST00000467288 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
GMDS-203ENST00000467288 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
GMDS-203ENST00000467288 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
GMDS-203ENST00000467288 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
GMDS-203ENST00000467288 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
GMDS-203ENST00000467288 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
GMDS-203ENST00000467288 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
GMDS-203ENST00000467288 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
GMDS-203ENST00000467288 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
GMDS-203ENST00000467288 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
GMDS-203ENST00000467288 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
GMDS-203ENST00000467288 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
GMDS-203ENST00000467288 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
GMDS-203ENST00000467288 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
GMDS-203ENST00000467288 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
GMDS-203ENST00000467288 KRTAP21-2Q3LI59 83 aa3.87□□□□□ -1.79
GMDS-203ENST00000467288 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
GMDS-203ENST00000467288 INE1O15225 51 aa3.75□□□□□ -1.81
GMDS-203ENST00000467288 H3BS24 57 aa3.67□□□□□ -1.82
GMDS-203ENST00000467288 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
GMDS-203ENST00000467288 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
GMDS-203ENST00000467288 PRM1P04553 51 aa3.14□□□□□ -1.91
GMDS-203ENST00000467288 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
GMDS-203ENST00000467288 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms