RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 MT1BP07438 61 aa3.19□□□□□ -1.9
SND1-205ENST00000467238 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SND1-205ENST00000467238 KMT2DO14686 5537 aa3.17□□□□□ -1.9
SND1-205ENST00000467238 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
SND1-205ENST00000467238 S4R3F8 94 aa3.17□□□□□ -1.9
SND1-205ENST00000467238 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
SND1-205ENST00000467238 CSAG1Q6PB30 78 aa3.16□□□□□ -1.9
SND1-205ENST00000467238 K7ERS5 55 aa3.15□□□□□ -1.91
SND1-205ENST00000467238 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
SND1-205ENST00000467238 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
SND1-205ENST00000467238 ROMO1P60602 79 aa3.08□□□□□ -1.92
SND1-205ENST00000467238 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
SND1-205ENST00000467238 A0A1B0GU33 70 aa3.05□□□□□ -1.92
SND1-205ENST00000467238 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
SND1-205ENST00000467238 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
SND1-205ENST00000467238 H0YAA0 97 aa3.02□□□□□ -1.93
SND1-205ENST00000467238 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
SND1-205ENST00000467238 MT1XP80297 61 aa2.96□□□□□ -1.94
SND1-205ENST00000467238 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
SND1-205ENST00000467238 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
SND1-205ENST00000467238 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
SND1-205ENST00000467238 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SND1-205ENST00000467238 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
SND1-205ENST00000467238 SPRR2EP22531 72 aa2.92□□□□□ -1.94
SND1-205ENST00000467238 SPRR2BP35325 72 aa2.92□□□□□ -1.94
SND1-205ENST00000467238 SPRR2AP35326 72 aa2.92□□□□□ -1.94
SND1-205ENST00000467238 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
SND1-205ENST00000467238 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
SND1-205ENST00000467238 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
SND1-205ENST00000467238 P0C880 135 aa2.9□□□□□ -1.95
SND1-205ENST00000467238 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
SND1-205ENST00000467238 R4GN34 69 aa2.9□□□□□ -1.95
SND1-205ENST00000467238 M0QZ58 72 aa2.88□□□□□ -1.95
SND1-205ENST00000467238 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
SND1-205ENST00000467238 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SND1-205ENST00000467238 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
SND1-205ENST00000467238 SPRR2DP22532 72 aa2.82□□□□□ -1.96
SND1-205ENST00000467238 A0A0D9SG42 100 aa2.74□□□□□ -1.97
SND1-205ENST00000467238 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
SND1-205ENST00000467238 KRTAP13-4Q3LI77 160 aa2.71□□□□□ -1.98
SND1-205ENST00000467238 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SND1-205ENST00000467238 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
SND1-205ENST00000467238 KRTAP12-1P59990 96 aa2.7□□□□□ -1.98
SND1-205ENST00000467238 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
SND1-205ENST00000467238 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
SND1-205ENST00000467238 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
SND1-205ENST00000467238 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
SND1-205ENST00000467238 MT1EP04732 61 aa2.63□□□□□ -1.99
SND1-205ENST00000467238 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
SND1-205ENST00000467238 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
SND1-205ENST00000467238 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
SND1-205ENST00000467238 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
SND1-205ENST00000467238 MT1GP13640 62 aa2.54□□□□□ -2
SND1-205ENST00000467238 MT1MQ8N339 61 aa2.51□□□□□ -2.01
SND1-205ENST00000467238 MT1LQ93083 61 aa2.5□□□□□ -2.01
SND1-205ENST00000467238 TNP1P09430 55 aa2.48□□□□□ -2.01
SND1-205ENST00000467238 MT4P47944 62 aa2.48□□□□□ -2.01
SND1-205ENST00000467238 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
SND1-205ENST00000467238 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.01
SND1-205ENST00000467238 INE1O15225 51 aa2.46□□□□□ -2.02
SND1-205ENST00000467238 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
SND1-205ENST00000467238 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
SND1-205ENST00000467238 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SND1-205ENST00000467238 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
SND1-205ENST00000467238 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
SND1-205ENST00000467238 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
SND1-205ENST00000467238 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
SND1-205ENST00000467238 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
SND1-205ENST00000467238 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
SND1-205ENST00000467238 MT1AP04731 61 aa2.12□□□□□ -2.07
SND1-205ENST00000467238 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
SND1-205ENST00000467238 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
SND1-205ENST00000467238 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
SND1-205ENST00000467238 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
SND1-205ENST00000467238 PRM1P04553 51 aa1.53□□□□□ -2.16
SND1-205ENST00000467238 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SND1-205ENST00000467238 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
SND1-205ENST00000467238 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 36.7 ms