RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MT1GP13640 62 aa0.84□□□□□ -2.27
XRN1-206ENST00000467077 SPATA45Q537H7 98 aa0.84□□□□□ -2.27
XRN1-206ENST00000467077 C20orf197Q8N268 126 aa0.84□□□□□ -2.27
XRN1-206ENST00000467077 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.28
XRN1-206ENST00000467077 MT-ATP8P03928 68 aa0.83□□□□□ -2.28
XRN1-206ENST00000467077 ACYP1P07311 99 aa0.83□□□□□ -2.28
XRN1-206ENST00000467077 ATXN8Q156A1 80 aa0.83□□□□□ -2.28
XRN1-206ENST00000467077 VAMP8Q9BV40 100 aa0.83□□□□□ -2.28
XRN1-206ENST00000467077 CYP4F30PQ9H0H9 118 aa0.83□□□□□ -2.28
XRN1-206ENST00000467077 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
XRN1-206ENST00000467077 HSD52Q0P140 79 aa0.82□□□□□ -2.28
XRN1-206ENST00000467077 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
XRN1-206ENST00000467077 MT1MQ8N339 61 aa0.82□□□□□ -2.28
XRN1-206ENST00000467077 TP53AIP1Q9HCN2 124 aa0.82□□□□□ -2.28
XRN1-206ENST00000467077 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
XRN1-206ENST00000467077 S100A6P06703 90 aa0.81□□□□□ -2.28
XRN1-206ENST00000467077 S100A1P23297 94 aa0.81□□□□□ -2.28
XRN1-206ENST00000467077 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
XRN1-206ENST00000467077 TRAV22A0A0B4J277 110 aa0.8□□□□□ -2.28
XRN1-206ENST00000467077 LOC101927531A0A1B0GV80 90 aa0.8□□□□□ -2.28
XRN1-206ENST00000467077 A0A0D9SG42 100 aa0.79□□□□□ -2.28
XRN1-206ENST00000467077 TSTD3H0UI37 97 aa0.79□□□□□ -2.28
XRN1-206ENST00000467077 MT1LQ93083 61 aa0.79□□□□□ -2.28
XRN1-206ENST00000467077 UBL5Q9BZL1 73 aa0.78□□□□□ -2.28
XRN1-206ENST00000467077 SPCS1Q9Y6A9 102 aa0.78□□□□□ -2.28
XRN1-206ENST00000467077 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
XRN1-206ENST00000467077 H0Y9P7 68 aa0.77□□□□□ -2.29
XRN1-206ENST00000467077 ATOX1O00244 68 aa0.76□□□□□ -2.29
XRN1-206ENST00000467077 UQCR10Q9UDW1 63 aa0.76□□□□□ -2.29
XRN1-206ENST00000467077 UQCRQO14949 82 aa0.75□□□□□ -2.29
XRN1-206ENST00000467077 LINC00208Q96KT6 92 aa0.74□□□□□ -2.29
XRN1-206ENST00000467077 C10orf95Q9H7T3 257 aa0.74□□□□□ -2.29
XRN1-206ENST00000467077 SNURFQ9Y675 71 aa0.74□□□□□ -2.29
XRN1-206ENST00000467077 M0R143 59 aa0.73□□□□□ -2.29
XRN1-206ENST00000467077 TAX1BP3O14907 124 aa0.73□□□□□ -2.29
XRN1-206ENST00000467077 PYY3Q5JQD4 70 aa0.72□□□□□ -2.29
XRN1-206ENST00000467077 SPTSSBQ8NFR3 76 aa0.72□□□□□ -2.29
XRN1-206ENST00000467077 DMAC1Q96GE9 116 aa0.72□□□□□ -2.29
XRN1-206ENST00000467077 CHKB-CPT1BH3BT56 60 aa0.7□□□□□ -2.3
XRN1-206ENST00000467077 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
XRN1-206ENST00000467077 TNP1P09430 55 aa0.69□□□□□ -2.3
XRN1-206ENST00000467077 ACYP2P14621 99 aa0.69□□□□□ -2.3
XRN1-206ENST00000467077 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
XRN1-206ENST00000467077 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
XRN1-206ENST00000467077 SPATA8Q6RVD6 105 aa0.67□□□□□ -2.3
XRN1-206ENST00000467077 MT1AP04731 61 aa0.66□□□□□ -2.3
XRN1-206ENST00000467077 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
XRN1-206ENST00000467077 SCGB1A1P11684 91 aa0.65□□□□□ -2.31
XRN1-206ENST00000467077 ETDBQ3ZM63 59 aa0.65□□□□□ -2.31
XRN1-206ENST00000467077 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
XRN1-206ENST00000467077 CDC42SE1Q9NRR8 79 aa0.64□□□□□ -2.31
XRN1-206ENST00000467077 F8W1H4 67 aa0.63□□□□□ -2.31
XRN1-206ENST00000467077 INE1O15225 51 aa0.63□□□□□ -2.31
XRN1-206ENST00000467077 GTF2H5Q6ZYL4 71 aa0.63□□□□□ -2.31
XRN1-206ENST00000467077 SMIM6P0DI80 62 aa0.61□□□□□ -2.31
XRN1-206ENST00000467077 LINC00643Q86TS7 51 aa0.61□□□□□ -2.31
XRN1-206ENST00000467077 COL5A1-AS1Q5SY13 56 aa0.6□□□□□ -2.31
XRN1-206ENST00000467077 SERP2Q8N6R1 65 aa0.6□□□□□ -2.31
XRN1-206ENST00000467077 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
XRN1-206ENST00000467077 A0A1B0GU69 56 aa0.57□□□□□ -2.32
XRN1-206ENST00000467077 ROMO1P60602 79 aa0.57□□□□□ -2.32
XRN1-206ENST00000467077 SMIM20Q8N5G0 67 aa0.56□□□□□ -2.32
XRN1-206ENST00000467077 H7BZZ5 65 aa0.55□□□□□ -2.32
XRN1-206ENST00000467077 PRR15LQ9BU68 103 aa0.54□□□□□ -2.32
XRN1-206ENST00000467077 RPS28P62857 69 aaKnown RBP0.51□□□□□ -2.33
XRN1-206ENST00000467077 LOC105371267A0A1B0GV96 52 aa0.5□□□□□ -2.33
XRN1-206ENST00000467077 J3QR89 54 aa0.5□□□□□ -2.33
XRN1-206ENST00000467077 COX7CP15954 63 aa0.49□□□□□ -2.33
XRN1-206ENST00000467077 UQCR11O14957 56 aa0.48□□□□□ -2.33
XRN1-206ENST00000467077 A0A1B0GV90 55 aa0.46□□□□□ -2.34
XRN1-206ENST00000467077 MIR22HGQ0VDD5 57 aa0.46□□□□□ -2.34
XRN1-206ENST00000467077 LINC01558Q9Y6Z2 57 aa0.44□□□□□ -2.34
XRN1-206ENST00000467077 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
XRN1-206ENST00000467077 K7ERU9 68 aa0.41□□□□□ -2.34
XRN1-206ENST00000467077 ATP5EP56381 51 aaPredicted RBP0.38□□□□□ -2.35
XRN1-206ENST00000467077 CCDC179H3BU77 68 aa0.34□□□□□ -2.36
XRN1-206ENST00000467077 BRK1Q8WUW1 75 aa0.25□□□□□ -2.37
XRN1-206ENST00000467077 PRM1P04553 51 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms