RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SPRR2BP35325 72 aa5.61□□□□□ -1.51
NPHP4-205ENST00000466897 SPRR2AP35326 72 aa5.61□□□□□ -1.51
NPHP4-205ENST00000466897 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
NPHP4-205ENST00000466897 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
NPHP4-205ENST00000466897 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
NPHP4-205ENST00000466897 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
NPHP4-205ENST00000466897 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
NPHP4-205ENST00000466897 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
NPHP4-205ENST00000466897 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
NPHP4-205ENST00000466897 MT1LQ93083 61 aa5.44□□□□□ -1.54
NPHP4-205ENST00000466897 MT1GP13640 62 aa5.42□□□□□ -1.54
NPHP4-205ENST00000466897 SPRR2DP22532 72 aa5.42□□□□□ -1.54
NPHP4-205ENST00000466897 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
NPHP4-205ENST00000466897 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
NPHP4-205ENST00000466897 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
NPHP4-205ENST00000466897 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
NPHP4-205ENST00000466897 MT1MQ8N339 61 aa5.31□□□□□ -1.56
NPHP4-205ENST00000466897 H3BS24 57 aa5.3□□□□□ -1.56
NPHP4-205ENST00000466897 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
NPHP4-205ENST00000466897 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
NPHP4-205ENST00000466897 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
NPHP4-205ENST00000466897 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
NPHP4-205ENST00000466897 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
NPHP4-205ENST00000466897 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
NPHP4-205ENST00000466897 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
NPHP4-205ENST00000466897 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
NPHP4-205ENST00000466897 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
NPHP4-205ENST00000466897 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
NPHP4-205ENST00000466897 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
NPHP4-205ENST00000466897 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
NPHP4-205ENST00000466897 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
NPHP4-205ENST00000466897 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
NPHP4-205ENST00000466897 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
NPHP4-205ENST00000466897 MT4P47944 62 aa4.72□□□□□ -1.65
NPHP4-205ENST00000466897 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
NPHP4-205ENST00000466897 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
NPHP4-205ENST00000466897 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
NPHP4-205ENST00000466897 MT1AP04731 61 aa4.64□□□□□ -1.67
NPHP4-205ENST00000466897 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
NPHP4-205ENST00000466897 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
NPHP4-205ENST00000466897 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
NPHP4-205ENST00000466897 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
NPHP4-205ENST00000466897 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
NPHP4-205ENST00000466897 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
NPHP4-205ENST00000466897 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
NPHP4-205ENST00000466897 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
NPHP4-205ENST00000466897 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
NPHP4-205ENST00000466897 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
NPHP4-205ENST00000466897 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
NPHP4-205ENST00000466897 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
NPHP4-205ENST00000466897 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
NPHP4-205ENST00000466897 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
NPHP4-205ENST00000466897 MT3P25713 68 aa4.22□□□□□ -1.73
NPHP4-205ENST00000466897 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
NPHP4-205ENST00000466897 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
NPHP4-205ENST00000466897 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
NPHP4-205ENST00000466897 INE1O15225 51 aa3.93□□□□□ -1.78
NPHP4-205ENST00000466897 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
NPHP4-205ENST00000466897 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
NPHP4-205ENST00000466897 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
NPHP4-205ENST00000466897 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
NPHP4-205ENST00000466897 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
NPHP4-205ENST00000466897 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
NPHP4-205ENST00000466897 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
NPHP4-205ENST00000466897 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
NPHP4-205ENST00000466897 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
NPHP4-205ENST00000466897 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
NPHP4-205ENST00000466897 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
NPHP4-205ENST00000466897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
NPHP4-205ENST00000466897 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
NPHP4-205ENST00000466897 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
NPHP4-205ENST00000466897 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
NPHP4-205ENST00000466897 PRM1P04553 51 aa2.95□□□□□ -1.94
NPHP4-205ENST00000466897 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
NPHP4-205ENST00000466897 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
NPHP4-205ENST00000466897 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
NPHP4-205ENST00000466897 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
NPHP4-205ENST00000466897 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 61.9 ms