RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 SPRR2AP35326 72 aa6.03□□□□□ -1.44
HLA-C-205ENST00000466892 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
HLA-C-205ENST00000466892 NEBP20929 6669 aa6.01□□□□□ -1.45
HLA-C-205ENST00000466892 MDN1Q9NU22 5596 aa6□□□□□ -1.45
HLA-C-205ENST00000466892 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
HLA-C-205ENST00000466892 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
HLA-C-205ENST00000466892 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
HLA-C-205ENST00000466892 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
HLA-C-205ENST00000466892 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
HLA-C-205ENST00000466892 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
HLA-C-205ENST00000466892 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
HLA-C-205ENST00000466892 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
HLA-C-205ENST00000466892 MT1GP13640 62 aa5.84□□□□□ -1.47
HLA-C-205ENST00000466892 SPRR2DP22532 72 aa5.84□□□□□ -1.47
HLA-C-205ENST00000466892 MT1LQ93083 61 aa5.84□□□□□ -1.47
HLA-C-205ENST00000466892 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
HLA-C-205ENST00000466892 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
HLA-C-205ENST00000466892 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
HLA-C-205ENST00000466892 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
HLA-C-205ENST00000466892 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
HLA-C-205ENST00000466892 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
HLA-C-205ENST00000466892 MT1MQ8N339 61 aa5.7□□□□□ -1.5
HLA-C-205ENST00000466892 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
HLA-C-205ENST00000466892 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
HLA-C-205ENST00000466892 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
HLA-C-205ENST00000466892 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
HLA-C-205ENST00000466892 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
HLA-C-205ENST00000466892 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
HLA-C-205ENST00000466892 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HLA-C-205ENST00000466892 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
HLA-C-205ENST00000466892 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
HLA-C-205ENST00000466892 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
HLA-C-205ENST00000466892 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
HLA-C-205ENST00000466892 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
HLA-C-205ENST00000466892 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
HLA-C-205ENST00000466892 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
HLA-C-205ENST00000466892 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
HLA-C-205ENST00000466892 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
HLA-C-205ENST00000466892 MT4P47944 62 aa5.02□□□□□ -1.61
HLA-C-205ENST00000466892 MT1AP04731 61 aa4.99□□□□□ -1.61
HLA-C-205ENST00000466892 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
HLA-C-205ENST00000466892 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
HLA-C-205ENST00000466892 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
HLA-C-205ENST00000466892 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
HLA-C-205ENST00000466892 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
HLA-C-205ENST00000466892 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
HLA-C-205ENST00000466892 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
HLA-C-205ENST00000466892 H3BS24 57 aa4.61□□□□□ -1.67
HLA-C-205ENST00000466892 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
HLA-C-205ENST00000466892 MT3P25713 68 aa4.57□□□□□ -1.68
HLA-C-205ENST00000466892 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
HLA-C-205ENST00000466892 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
HLA-C-205ENST00000466892 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
HLA-C-205ENST00000466892 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
HLA-C-205ENST00000466892 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
HLA-C-205ENST00000466892 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
HLA-C-205ENST00000466892 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
HLA-C-205ENST00000466892 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
HLA-C-205ENST00000466892 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
HLA-C-205ENST00000466892 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
HLA-C-205ENST00000466892 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
HLA-C-205ENST00000466892 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
HLA-C-205ENST00000466892 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
HLA-C-205ENST00000466892 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
HLA-C-205ENST00000466892 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
HLA-C-205ENST00000466892 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
HLA-C-205ENST00000466892 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
HLA-C-205ENST00000466892 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
HLA-C-205ENST00000466892 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
HLA-C-205ENST00000466892 INE1O15225 51 aa3.5□□□□□ -1.85
HLA-C-205ENST00000466892 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
HLA-C-205ENST00000466892 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
HLA-C-205ENST00000466892 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HLA-C-205ENST00000466892 PRM1P04553 51 aa3.15□□□□□ -1.91
HLA-C-205ENST00000466892 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
HLA-C-205ENST00000466892 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HLA-C-205ENST00000466892 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
HLA-C-205ENST00000466892 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms