RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
GAPDH-206ENST00000466525 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
GAPDH-206ENST00000466525 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
GAPDH-206ENST00000466525 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
GAPDH-206ENST00000466525 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
GAPDH-206ENST00000466525 KMT2DO14686 5537 aa5.53□□□□□ -1.52
GAPDH-206ENST00000466525 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
GAPDH-206ENST00000466525 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
GAPDH-206ENST00000466525 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
GAPDH-206ENST00000466525 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
GAPDH-206ENST00000466525 SPRR2EP22531 72 aa5.36□□□□□ -1.55
GAPDH-206ENST00000466525 SPRR2BP35325 72 aa5.36□□□□□ -1.55
GAPDH-206ENST00000466525 SPRR2AP35326 72 aa5.36□□□□□ -1.55
GAPDH-206ENST00000466525 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
GAPDH-206ENST00000466525 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
GAPDH-206ENST00000466525 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
GAPDH-206ENST00000466525 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
GAPDH-206ENST00000466525 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
GAPDH-206ENST00000466525 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
GAPDH-206ENST00000466525 SPRR2DP22532 72 aa5.2□□□□□ -1.58
GAPDH-206ENST00000466525 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
GAPDH-206ENST00000466525 MT1LQ93083 61 aa5.14□□□□□ -1.59
GAPDH-206ENST00000466525 MT1EP04732 61 aa5.11□□□□□ -1.59
GAPDH-206ENST00000466525 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
GAPDH-206ENST00000466525 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
GAPDH-206ENST00000466525 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
GAPDH-206ENST00000466525 MT1GP13640 62 aa4.78□□□□□ -1.64
GAPDH-206ENST00000466525 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
GAPDH-206ENST00000466525 MT1MQ8N339 61 aa4.76□□□□□ -1.65
GAPDH-206ENST00000466525 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
GAPDH-206ENST00000466525 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
GAPDH-206ENST00000466525 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
GAPDH-206ENST00000466525 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
GAPDH-206ENST00000466525 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
GAPDH-206ENST00000466525 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
GAPDH-206ENST00000466525 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
GAPDH-206ENST00000466525 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
GAPDH-206ENST00000466525 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
GAPDH-206ENST00000466525 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
GAPDH-206ENST00000466525 MT1AP04731 61 aa4.54□□□□□ -1.68
GAPDH-206ENST00000466525 MT4P47944 62 aa4.54□□□□□ -1.68
GAPDH-206ENST00000466525 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
GAPDH-206ENST00000466525 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
GAPDH-206ENST00000466525 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
GAPDH-206ENST00000466525 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
GAPDH-206ENST00000466525 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
GAPDH-206ENST00000466525 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
GAPDH-206ENST00000466525 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
GAPDH-206ENST00000466525 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
GAPDH-206ENST00000466525 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
GAPDH-206ENST00000466525 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
GAPDH-206ENST00000466525 PRM1P04553 51 aa4.1□□□□□ -1.75
GAPDH-206ENST00000466525 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
GAPDH-206ENST00000466525 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
GAPDH-206ENST00000466525 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
GAPDH-206ENST00000466525 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
GAPDH-206ENST00000466525 MT3P25713 68 aa3.9□□□□□ -1.78
GAPDH-206ENST00000466525 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
GAPDH-206ENST00000466525 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
GAPDH-206ENST00000466525 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
GAPDH-206ENST00000466525 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
GAPDH-206ENST00000466525 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
GAPDH-206ENST00000466525 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
GAPDH-206ENST00000466525 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
GAPDH-206ENST00000466525 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
GAPDH-206ENST00000466525 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
GAPDH-206ENST00000466525 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
GAPDH-206ENST00000466525 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
GAPDH-206ENST00000466525 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
GAPDH-206ENST00000466525 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
GAPDH-206ENST00000466525 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
GAPDH-206ENST00000466525 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
GAPDH-206ENST00000466525 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
GAPDH-206ENST00000466525 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
GAPDH-206ENST00000466525 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
GAPDH-206ENST00000466525 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
GAPDH-206ENST00000466525 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
GAPDH-206ENST00000466525 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms