RNA–Protein interactions for RNA: ENST00000466195.1

TSPAN13-202, Transcript of tetraspanin 13, humanhuman

TSL 4

Gene TSPAN13, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-202ENST00000466195 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
TSPAN13-202ENST00000466195 MT1EP04732 61 aa4.72□□□□□ -1.65
TSPAN13-202ENST00000466195 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
TSPAN13-202ENST00000466195 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
TSPAN13-202ENST00000466195 TMEM258P61165 79 aa4.66□□□□□ -1.66
TSPAN13-202ENST00000466195 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
TSPAN13-202ENST00000466195 TNP1P09430 55 aa4.65□□□□□ -1.67
TSPAN13-202ENST00000466195 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
TSPAN13-202ENST00000466195 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
TSPAN13-202ENST00000466195 UQCR11O14957 56 aa4.6□□□□□ -1.67
TSPAN13-202ENST00000466195 MT1GP13640 62 aa4.6□□□□□ -1.67
TSPAN13-202ENST00000466195 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
TSPAN13-202ENST00000466195 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
TSPAN13-202ENST00000466195 MT1LQ93083 61 aa4.52□□□□□ -1.69
TSPAN13-202ENST00000466195 MT1MQ8N339 61 aa4.5□□□□□ -1.69
TSPAN13-202ENST00000466195 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
TSPAN13-202ENST00000466195 K7ERS5 55 aa4.47□□□□□ -1.69
TSPAN13-202ENST00000466195 V9GYY9 64 aa4.45□□□□□ -1.7
TSPAN13-202ENST00000466195 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
TSPAN13-202ENST00000466195 PSPHP1O15172 72 aa4.39□□□□□ -1.71
TSPAN13-202ENST00000466195 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
TSPAN13-202ENST00000466195 Q1T7F1 81 aa4.36□□□□□ -1.71
TSPAN13-202ENST00000466195 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
TSPAN13-202ENST00000466195 MT4P47944 62 aa4.33□□□□□ -1.72
TSPAN13-202ENST00000466195 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
TSPAN13-202ENST00000466195 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
TSPAN13-202ENST00000466195 A6NED7 52 aa4.28□□□□□ -1.72
TSPAN13-202ENST00000466195 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
TSPAN13-202ENST00000466195 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
TSPAN13-202ENST00000466195 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
TSPAN13-202ENST00000466195 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
TSPAN13-202ENST00000466195 MT3P25713 68 aa4.18□□□□□ -1.74
TSPAN13-202ENST00000466195 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
TSPAN13-202ENST00000466195 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
TSPAN13-202ENST00000466195 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
TSPAN13-202ENST00000466195 ROMO1P60602 79 aa4.1□□□□□ -1.75
TSPAN13-202ENST00000466195 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
TSPAN13-202ENST00000466195 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
TSPAN13-202ENST00000466195 PCP4P48539 62 aa4.07□□□□□ -1.76
TSPAN13-202ENST00000466195 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
TSPAN13-202ENST00000466195 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
TSPAN13-202ENST00000466195 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
TSPAN13-202ENST00000466195 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
TSPAN13-202ENST00000466195 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
TSPAN13-202ENST00000466195 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
TSPAN13-202ENST00000466195 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
TSPAN13-202ENST00000466195 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
TSPAN13-202ENST00000466195 MT1AP04731 61 aa3.86□□□□□ -1.79
TSPAN13-202ENST00000466195 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
TSPAN13-202ENST00000466195 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
TSPAN13-202ENST00000466195 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
TSPAN13-202ENST00000466195 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
TSPAN13-202ENST00000466195 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
TSPAN13-202ENST00000466195 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TSPAN13-202ENST00000466195 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
TSPAN13-202ENST00000466195 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
TSPAN13-202ENST00000466195 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
TSPAN13-202ENST00000466195 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
TSPAN13-202ENST00000466195 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
TSPAN13-202ENST00000466195 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
TSPAN13-202ENST00000466195 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
TSPAN13-202ENST00000466195 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
TSPAN13-202ENST00000466195 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
TSPAN13-202ENST00000466195 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
TSPAN13-202ENST00000466195 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
TSPAN13-202ENST00000466195 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
TSPAN13-202ENST00000466195 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TSPAN13-202ENST00000466195 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
TSPAN13-202ENST00000466195 LCE1CQ5T751 118 aa3□□□□□ -1.93
TSPAN13-202ENST00000466195 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
TSPAN13-202ENST00000466195 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
TSPAN13-202ENST00000466195 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
TSPAN13-202ENST00000466195 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
TSPAN13-202ENST00000466195 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
TSPAN13-202ENST00000466195 PRM1P04553 51 aa2.08□□□□□ -2.08
TSPAN13-202ENST00000466195 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
TSPAN13-202ENST00000466195 INE1O15225 51 aa1.8□□□□□ -2.12
TSPAN13-202ENST00000466195 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 108.2 ms