RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-208ENST00000466101 TNP1P09430 55 aa6.29□□□□□ -1.4
CCNL1-208ENST00000466101 MT1EP04732 61 aa6.27□□□□□ -1.41
CCNL1-208ENST00000466101 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
CCNL1-208ENST00000466101 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
CCNL1-208ENST00000466101 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
CCNL1-208ENST00000466101 H3BS24 57 aa6.18□□□□□ -1.42
CCNL1-208ENST00000466101 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
CCNL1-208ENST00000466101 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
CCNL1-208ENST00000466101 K7ERS5 55 aa6.16□□□□□ -1.42
CCNL1-208ENST00000466101 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
CCNL1-208ENST00000466101 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
CCNL1-208ENST00000466101 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
CCNL1-208ENST00000466101 A6NED7 52 aa6.14□□□□□ -1.43
CCNL1-208ENST00000466101 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
CCNL1-208ENST00000466101 MT1GP13640 62 aa6.03□□□□□ -1.44
CCNL1-208ENST00000466101 MT1LQ93083 61 aa6.03□□□□□ -1.44
CCNL1-208ENST00000466101 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
CCNL1-208ENST00000466101 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
CCNL1-208ENST00000466101 MT1MQ8N339 61 aa5.96□□□□□ -1.46
CCNL1-208ENST00000466101 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
CCNL1-208ENST00000466101 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
CCNL1-208ENST00000466101 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CCNL1-208ENST00000466101 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CCNL1-208ENST00000466101 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
CCNL1-208ENST00000466101 ROMO1P60602 79 aa5.79□□□□□ -1.48
CCNL1-208ENST00000466101 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CCNL1-208ENST00000466101 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CCNL1-208ENST00000466101 MT4P47944 62 aa5.57□□□□□ -1.52
CCNL1-208ENST00000466101 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
CCNL1-208ENST00000466101 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
CCNL1-208ENST00000466101 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
CCNL1-208ENST00000466101 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
CCNL1-208ENST00000466101 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
CCNL1-208ENST00000466101 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
CCNL1-208ENST00000466101 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
CCNL1-208ENST00000466101 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
CCNL1-208ENST00000466101 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
CCNL1-208ENST00000466101 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
CCNL1-208ENST00000466101 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CCNL1-208ENST00000466101 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
CCNL1-208ENST00000466101 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
CCNL1-208ENST00000466101 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
CCNL1-208ENST00000466101 MT1AP04731 61 aa5.12□□□□□ -1.59
CCNL1-208ENST00000466101 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CCNL1-208ENST00000466101 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
CCNL1-208ENST00000466101 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
CCNL1-208ENST00000466101 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
CCNL1-208ENST00000466101 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CCNL1-208ENST00000466101 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
CCNL1-208ENST00000466101 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
CCNL1-208ENST00000466101 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
CCNL1-208ENST00000466101 MT3P25713 68 aa4.67□□□□□ -1.66
CCNL1-208ENST00000466101 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CCNL1-208ENST00000466101 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
CCNL1-208ENST00000466101 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
CCNL1-208ENST00000466101 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-208ENST00000466101 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
CCNL1-208ENST00000466101 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
CCNL1-208ENST00000466101 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
CCNL1-208ENST00000466101 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
CCNL1-208ENST00000466101 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
CCNL1-208ENST00000466101 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
CCNL1-208ENST00000466101 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
CCNL1-208ENST00000466101 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.75
CCNL1-208ENST00000466101 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
CCNL1-208ENST00000466101 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
CCNL1-208ENST00000466101 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
CCNL1-208ENST00000466101 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
CCNL1-208ENST00000466101 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
CCNL1-208ENST00000466101 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CCNL1-208ENST00000466101 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
CCNL1-208ENST00000466101 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
CCNL1-208ENST00000466101 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CCNL1-208ENST00000466101 PRM1P04553 51 aa2.99□□□□□ -1.93
CCNL1-208ENST00000466101 INE1O15225 51 aa2.78□□□□□ -1.96
CCNL1-208ENST00000466101 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CCNL1-208ENST00000466101 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
CCNL1-208ENST00000466101 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 105.4 ms