RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ROMO1P60602 79 aa3.47□□□□□ -1.85
DDR1-242ENST00000465966 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
DDR1-242ENST00000465966 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
DDR1-242ENST00000465966 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
DDR1-242ENST00000465966 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
DDR1-242ENST00000465966 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
DDR1-242ENST00000465966 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
DDR1-242ENST00000465966 TNP1P09430 55 aa3.34□□□□□ -1.87
DDR1-242ENST00000465966 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
DDR1-242ENST00000465966 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
DDR1-242ENST00000465966 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
DDR1-242ENST00000465966 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
DDR1-242ENST00000465966 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
DDR1-242ENST00000465966 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
DDR1-242ENST00000465966 MT4P47944 62 aa3.2□□□□□ -1.9
DDR1-242ENST00000465966 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
DDR1-242ENST00000465966 MT1EP04732 61 aa3.17□□□□□ -1.9
DDR1-242ENST00000465966 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
DDR1-242ENST00000465966 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
DDR1-242ENST00000465966 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
DDR1-242ENST00000465966 MT1GP13640 62 aa3.12□□□□□ -1.91
DDR1-242ENST00000465966 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
DDR1-242ENST00000465966 H3BS24 57 aa3.11□□□□□ -1.91
DDR1-242ENST00000465966 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
DDR1-242ENST00000465966 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
DDR1-242ENST00000465966 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
DDR1-242ENST00000465966 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
DDR1-242ENST00000465966 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
DDR1-242ENST00000465966 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
DDR1-242ENST00000465966 MT1MQ8N339 61 aa3.03□□□□□ -1.92
DDR1-242ENST00000465966 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
DDR1-242ENST00000465966 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
DDR1-242ENST00000465966 MT1LQ93083 61 aa2.99□□□□□ -1.93
DDR1-242ENST00000465966 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
DDR1-242ENST00000465966 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
DDR1-242ENST00000465966 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
DDR1-242ENST00000465966 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
DDR1-242ENST00000465966 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
DDR1-242ENST00000465966 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
DDR1-242ENST00000465966 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
DDR1-242ENST00000465966 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
DDR1-242ENST00000465966 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
DDR1-242ENST00000465966 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
DDR1-242ENST00000465966 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
DDR1-242ENST00000465966 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
DDR1-242ENST00000465966 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
DDR1-242ENST00000465966 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
DDR1-242ENST00000465966 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
DDR1-242ENST00000465966 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
DDR1-242ENST00000465966 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
DDR1-242ENST00000465966 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
DDR1-242ENST00000465966 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
DDR1-242ENST00000465966 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
DDR1-242ENST00000465966 MT1AP04731 61 aa2.54□□□□□ -2
DDR1-242ENST00000465966 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
DDR1-242ENST00000465966 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
DDR1-242ENST00000465966 KRTAP9-4Q9BYQ2 154 aa2.49□□□□□ -2.01
DDR1-242ENST00000465966 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
DDR1-242ENST00000465966 INE1O15225 51 aa2.45□□□□□ -2.02
DDR1-242ENST00000465966 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
DDR1-242ENST00000465966 MT3P25713 68 aa2.36□□□□□ -2.03
DDR1-242ENST00000465966 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
DDR1-242ENST00000465966 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
DDR1-242ENST00000465966 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
DDR1-242ENST00000465966 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
DDR1-242ENST00000465966 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
DDR1-242ENST00000465966 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
DDR1-242ENST00000465966 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
DDR1-242ENST00000465966 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
DDR1-242ENST00000465966 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
DDR1-242ENST00000465966 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
DDR1-242ENST00000465966 PRM1P04553 51 aa1.83□□□□□ -2.12
DDR1-242ENST00000465966 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
DDR1-242ENST00000465966 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
DDR1-242ENST00000465966 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
DDR1-242ENST00000465966 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
DDR1-242ENST00000465966 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
DDR1-242ENST00000465966 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 69.4 ms