RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
COL2A1-203ENST00000465743 DSTQ03001 7570 aaKnown RBP7.33□□□□□ -1.24
COL2A1-203ENST00000465743 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
COL2A1-203ENST00000465743 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
COL2A1-203ENST00000465743 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
COL2A1-203ENST00000465743 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
COL2A1-203ENST00000465743 MT1GP13640 62 aa7.21□□□□□ -1.26
COL2A1-203ENST00000465743 MT1LQ93083 61 aa7.18□□□□□ -1.26
COL2A1-203ENST00000465743 MT1MQ8N339 61 aa7.17□□□□□ -1.26
COL2A1-203ENST00000465743 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
COL2A1-203ENST00000465743 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
COL2A1-203ENST00000465743 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
COL2A1-203ENST00000465743 GPR98Q8WXG9 6306 aa7.06□□□□□ -1.28
COL2A1-203ENST00000465743 ROMO1P60602 79 aa7.06□□□□□ -1.28
COL2A1-203ENST00000465743 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
COL2A1-203ENST00000465743 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
COL2A1-203ENST00000465743 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
COL2A1-203ENST00000465743 MT4P47944 62 aa6.95□□□□□ -1.3
COL2A1-203ENST00000465743 LCE4AQ5TA78 99 aa6.92□□□□□ -1.3
COL2A1-203ENST00000465743 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
COL2A1-203ENST00000465743 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
COL2A1-203ENST00000465743 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
COL2A1-203ENST00000465743 AHNAK2Q8IVF2 5795 aa6.77□□□□□ -1.33
COL2A1-203ENST00000465743 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
COL2A1-203ENST00000465743 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
COL2A1-203ENST00000465743 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
COL2A1-203ENST00000465743 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
COL2A1-203ENST00000465743 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
COL2A1-203ENST00000465743 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
COL2A1-203ENST00000465743 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
COL2A1-203ENST00000465743 KRTAP20-2Q3LI61 65 aa6.48□□□□□ -1.37
COL2A1-203ENST00000465743 PMAIP1Q13794 54 aa6.46□□□□□ -1.38
COL2A1-203ENST00000465743 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
COL2A1-203ENST00000465743 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
COL2A1-203ENST00000465743 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
COL2A1-203ENST00000465743 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
COL2A1-203ENST00000465743 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
COL2A1-203ENST00000465743 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
COL2A1-203ENST00000465743 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
COL2A1-203ENST00000465743 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
COL2A1-203ENST00000465743 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
COL2A1-203ENST00000465743 MT1AP04731 61 aa6.09□□□□□ -1.43
COL2A1-203ENST00000465743 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
COL2A1-203ENST00000465743 KTN1-AS1Q86SY8 53 aa5.92□□□□□ -1.46
COL2A1-203ENST00000465743 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
COL2A1-203ENST00000465743 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
COL2A1-203ENST00000465743 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
COL2A1-203ENST00000465743 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
COL2A1-203ENST00000465743 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
COL2A1-203ENST00000465743 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
COL2A1-203ENST00000465743 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
COL2A1-203ENST00000465743 MT3P25713 68 aa5.53□□□□□ -1.52
COL2A1-203ENST00000465743 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
COL2A1-203ENST00000465743 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
COL2A1-203ENST00000465743 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
COL2A1-203ENST00000465743 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
COL2A1-203ENST00000465743 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
COL2A1-203ENST00000465743 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
COL2A1-203ENST00000465743 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
COL2A1-203ENST00000465743 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
COL2A1-203ENST00000465743 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
COL2A1-203ENST00000465743 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
COL2A1-203ENST00000465743 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
COL2A1-203ENST00000465743 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
COL2A1-203ENST00000465743 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
COL2A1-203ENST00000465743 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
COL2A1-203ENST00000465743 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
COL2A1-203ENST00000465743 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
COL2A1-203ENST00000465743 H3BS24 57 aa4.07□□□□□ -1.76
COL2A1-203ENST00000465743 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
COL2A1-203ENST00000465743 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
COL2A1-203ENST00000465743 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
COL2A1-203ENST00000465743 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
COL2A1-203ENST00000465743 INE1O15225 51 aa3.64□□□□□ -1.83
COL2A1-203ENST00000465743 PRM1P04553 51 aa3.62□□□□□ -1.83
COL2A1-203ENST00000465743 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
COL2A1-203ENST00000465743 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
COL2A1-203ENST00000465743 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 75.3 ms