RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
TMCO1-204ENST00000465705 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
TMCO1-204ENST00000465705 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
TMCO1-204ENST00000465705 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
TMCO1-204ENST00000465705 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
TMCO1-204ENST00000465705 KMT2DO14686 5537 aa4.43□□□□□ -1.7
TMCO1-204ENST00000465705 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
TMCO1-204ENST00000465705 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
TMCO1-204ENST00000465705 MDN1Q9NU22 5596 aa4.4□□□□□ -1.7
TMCO1-204ENST00000465705 A6NED7 52 aa4.4□□□□□ -1.71
TMCO1-204ENST00000465705 K7ERS5 55 aa4.38□□□□□ -1.71
TMCO1-204ENST00000465705 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
TMCO1-204ENST00000465705 TNP1P09430 55 aa4.33□□□□□ -1.72
TMCO1-204ENST00000465705 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
TMCO1-204ENST00000465705 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
TMCO1-204ENST00000465705 SPRR2EP22531 72 aa4.3□□□□□ -1.72
TMCO1-204ENST00000465705 SPRR2BP35325 72 aa4.3□□□□□ -1.72
TMCO1-204ENST00000465705 SPRR2AP35326 72 aa4.3□□□□□ -1.72
TMCO1-204ENST00000465705 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
TMCO1-204ENST00000465705 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
TMCO1-204ENST00000465705 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
TMCO1-204ENST00000465705 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
TMCO1-204ENST00000465705 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
TMCO1-204ENST00000465705 MT1EP04732 61 aa4.18□□□□□ -1.74
TMCO1-204ENST00000465705 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
TMCO1-204ENST00000465705 SPRR2DP22532 72 aa4.17□□□□□ -1.74
TMCO1-204ENST00000465705 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
TMCO1-204ENST00000465705 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
TMCO1-204ENST00000465705 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
TMCO1-204ENST00000465705 ROMO1P60602 79 aa4.1□□□□□ -1.75
TMCO1-204ENST00000465705 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
TMCO1-204ENST00000465705 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
TMCO1-204ENST00000465705 MT1GP13640 62 aa4.03□□□□□ -1.76
TMCO1-204ENST00000465705 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
TMCO1-204ENST00000465705 MT1LQ93083 61 aa4.03□□□□□ -1.76
TMCO1-204ENST00000465705 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
TMCO1-204ENST00000465705 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
TMCO1-204ENST00000465705 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TMCO1-204ENST00000465705 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TMCO1-204ENST00000465705 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
TMCO1-204ENST00000465705 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
TMCO1-204ENST00000465705 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
TMCO1-204ENST00000465705 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
TMCO1-204ENST00000465705 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
TMCO1-204ENST00000465705 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
TMCO1-204ENST00000465705 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
TMCO1-204ENST00000465705 PRO0628Q9UI54 55 aa3.7□□□□□ -1.82
TMCO1-204ENST00000465705 MT4P47944 62 aa3.63□□□□□ -1.83
TMCO1-204ENST00000465705 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
TMCO1-204ENST00000465705 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
TMCO1-204ENST00000465705 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
TMCO1-204ENST00000465705 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
TMCO1-204ENST00000465705 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
TMCO1-204ENST00000465705 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
TMCO1-204ENST00000465705 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
TMCO1-204ENST00000465705 MT1AP04731 61 aa3.44□□□□□ -1.86
TMCO1-204ENST00000465705 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
TMCO1-204ENST00000465705 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
TMCO1-204ENST00000465705 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
TMCO1-204ENST00000465705 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
TMCO1-204ENST00000465705 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
TMCO1-204ENST00000465705 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
TMCO1-204ENST00000465705 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
TMCO1-204ENST00000465705 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
TMCO1-204ENST00000465705 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
TMCO1-204ENST00000465705 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
TMCO1-204ENST00000465705 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
TMCO1-204ENST00000465705 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
TMCO1-204ENST00000465705 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
TMCO1-204ENST00000465705 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
TMCO1-204ENST00000465705 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TMCO1-204ENST00000465705 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
TMCO1-204ENST00000465705 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
TMCO1-204ENST00000465705 INE1O15225 51 aa2.16□□□□□ -2.06
TMCO1-204ENST00000465705 PRM1P04553 51 aa2.11□□□□□ -2.07
TMCO1-204ENST00000465705 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
TMCO1-204ENST00000465705 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TMCO1-204ENST00000465705 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms