RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
SCAMP3-204ENST00000465312 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
SCAMP3-204ENST00000465312 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
SCAMP3-204ENST00000465312 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
SCAMP3-204ENST00000465312 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
SCAMP3-204ENST00000465312 MT1LQ93083 61 aa6.6□□□□□ -1.35
SCAMP3-204ENST00000465312 MT1GP13640 62 aa6.59□□□□□ -1.35
SCAMP3-204ENST00000465312 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
SCAMP3-204ENST00000465312 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
SCAMP3-204ENST00000465312 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
SCAMP3-204ENST00000465312 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
SCAMP3-204ENST00000465312 MT1MQ8N339 61 aa6.49□□□□□ -1.37
SCAMP3-204ENST00000465312 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
SCAMP3-204ENST00000465312 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
SCAMP3-204ENST00000465312 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
SCAMP3-204ENST00000465312 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
SCAMP3-204ENST00000465312 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
SCAMP3-204ENST00000465312 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
SCAMP3-204ENST00000465312 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
SCAMP3-204ENST00000465312 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
SCAMP3-204ENST00000465312 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
SCAMP3-204ENST00000465312 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
SCAMP3-204ENST00000465312 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
SCAMP3-204ENST00000465312 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SCAMP3-204ENST00000465312 MT4P47944 62 aa5.95□□□□□ -1.46
SCAMP3-204ENST00000465312 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
SCAMP3-204ENST00000465312 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
SCAMP3-204ENST00000465312 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
SCAMP3-204ENST00000465312 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
SCAMP3-204ENST00000465312 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
SCAMP3-204ENST00000465312 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
SCAMP3-204ENST00000465312 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
SCAMP3-204ENST00000465312 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
SCAMP3-204ENST00000465312 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
SCAMP3-204ENST00000465312 MT1AP04731 61 aa5.63□□□□□ -1.51
SCAMP3-204ENST00000465312 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SCAMP3-204ENST00000465312 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
SCAMP3-204ENST00000465312 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
SCAMP3-204ENST00000465312 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
SCAMP3-204ENST00000465312 H3BS24 57 aa5.49□□□□□ -1.53
SCAMP3-204ENST00000465312 GPR98Q8WXG9 6306 aa5.44□□□□□ -1.54
SCAMP3-204ENST00000465312 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
SCAMP3-204ENST00000465312 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SCAMP3-204ENST00000465312 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
SCAMP3-204ENST00000465312 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
SCAMP3-204ENST00000465312 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
SCAMP3-204ENST00000465312 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
SCAMP3-204ENST00000465312 MT3P25713 68 aa5.15□□□□□ -1.59
SCAMP3-204ENST00000465312 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
SCAMP3-204ENST00000465312 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
SCAMP3-204ENST00000465312 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
SCAMP3-204ENST00000465312 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
SCAMP3-204ENST00000465312 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
SCAMP3-204ENST00000465312 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SCAMP3-204ENST00000465312 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
SCAMP3-204ENST00000465312 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
SCAMP3-204ENST00000465312 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
SCAMP3-204ENST00000465312 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
SCAMP3-204ENST00000465312 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SCAMP3-204ENST00000465312 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
SCAMP3-204ENST00000465312 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
SCAMP3-204ENST00000465312 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
SCAMP3-204ENST00000465312 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
SCAMP3-204ENST00000465312 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
SCAMP3-204ENST00000465312 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
SCAMP3-204ENST00000465312 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
SCAMP3-204ENST00000465312 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SCAMP3-204ENST00000465312 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
SCAMP3-204ENST00000465312 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SCAMP3-204ENST00000465312 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
SCAMP3-204ENST00000465312 INE1O15225 51 aa3.6□□□□□ -1.83
SCAMP3-204ENST00000465312 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SCAMP3-204ENST00000465312 PRM1P04553 51 aa3.51□□□□□ -1.85
SCAMP3-204ENST00000465312 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SCAMP3-204ENST00000465312 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
SCAMP3-204ENST00000465312 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SCAMP3-204ENST00000465312 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SCAMP3-204ENST00000465312 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 114 ms