RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
ERGIC3-212ENST00000465298 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
ERGIC3-212ENST00000465298 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
ERGIC3-212ENST00000465298 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
ERGIC3-212ENST00000465298 MT1GP13640 62 aa4.78□□□□□ -1.64
ERGIC3-212ENST00000465298 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
ERGIC3-212ENST00000465298 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
ERGIC3-212ENST00000465298 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
ERGIC3-212ENST00000465298 MT1LQ93083 61 aa4.69□□□□□ -1.66
ERGIC3-212ENST00000465298 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
ERGIC3-212ENST00000465298 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
ERGIC3-212ENST00000465298 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
ERGIC3-212ENST00000465298 MT1MQ8N339 61 aa4.61□□□□□ -1.67
ERGIC3-212ENST00000465298 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
ERGIC3-212ENST00000465298 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
ERGIC3-212ENST00000465298 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
ERGIC3-212ENST00000465298 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
ERGIC3-212ENST00000465298 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
ERGIC3-212ENST00000465298 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
ERGIC3-212ENST00000465298 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
ERGIC3-212ENST00000465298 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
ERGIC3-212ENST00000465298 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
ERGIC3-212ENST00000465298 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
ERGIC3-212ENST00000465298 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
ERGIC3-212ENST00000465298 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
ERGIC3-212ENST00000465298 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
ERGIC3-212ENST00000465298 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
ERGIC3-212ENST00000465298 MT4P47944 62 aa4.15□□□□□ -1.75
ERGIC3-212ENST00000465298 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
ERGIC3-212ENST00000465298 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
ERGIC3-212ENST00000465298 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
ERGIC3-212ENST00000465298 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
ERGIC3-212ENST00000465298 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
ERGIC3-212ENST00000465298 MT1AP04731 61 aa4.03□□□□□ -1.76
ERGIC3-212ENST00000465298 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
ERGIC3-212ENST00000465298 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
ERGIC3-212ENST00000465298 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
ERGIC3-212ENST00000465298 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
ERGIC3-212ENST00000465298 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
ERGIC3-212ENST00000465298 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
ERGIC3-212ENST00000465298 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
ERGIC3-212ENST00000465298 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
ERGIC3-212ENST00000465298 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
ERGIC3-212ENST00000465298 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
ERGIC3-212ENST00000465298 MT3P25713 68 aa3.73□□□□□ -1.81
ERGIC3-212ENST00000465298 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
ERGIC3-212ENST00000465298 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
ERGIC3-212ENST00000465298 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
ERGIC3-212ENST00000465298 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
ERGIC3-212ENST00000465298 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
ERGIC3-212ENST00000465298 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
ERGIC3-212ENST00000465298 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
ERGIC3-212ENST00000465298 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
ERGIC3-212ENST00000465298 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
ERGIC3-212ENST00000465298 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
ERGIC3-212ENST00000465298 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
ERGIC3-212ENST00000465298 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ERGIC3-212ENST00000465298 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
ERGIC3-212ENST00000465298 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
ERGIC3-212ENST00000465298 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
ERGIC3-212ENST00000465298 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
ERGIC3-212ENST00000465298 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
ERGIC3-212ENST00000465298 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
ERGIC3-212ENST00000465298 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
ERGIC3-212ENST00000465298 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
ERGIC3-212ENST00000465298 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
ERGIC3-212ENST00000465298 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
ERGIC3-212ENST00000465298 INE1O15225 51 aa2.7□□□□□ -1.98
ERGIC3-212ENST00000465298 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
ERGIC3-212ENST00000465298 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
ERGIC3-212ENST00000465298 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
ERGIC3-212ENST00000465298 PRM1P04553 51 aa2.45□□□□□ -2.02
ERGIC3-212ENST00000465298 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
ERGIC3-212ENST00000465298 H3BS24 57 aa2.36□□□□□ -2.03
ERGIC3-212ENST00000465298 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
ERGIC3-212ENST00000465298 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
ERGIC3-212ENST00000465298 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
ERGIC3-212ENST00000465298 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms