RNA–Protein interactions for RNA: ENST00000465135.1

C1orf56-202, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-202ENST00000465135 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
C1orf56-202ENST00000465135 MT1EP04732 61 aa3.95□□□□□ -1.78
C1orf56-202ENST00000465135 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
C1orf56-202ENST00000465135 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
C1orf56-202ENST00000465135 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
C1orf56-202ENST00000465135 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
C1orf56-202ENST00000465135 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
C1orf56-202ENST00000465135 UQCR11O14957 56 aa3.87□□□□□ -1.79
C1orf56-202ENST00000465135 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
C1orf56-202ENST00000465135 TNP1P09430 55 aa3.85□□□□□ -1.79
C1orf56-202ENST00000465135 PCP4P48539 62 aa3.84□□□□□ -1.79
C1orf56-202ENST00000465135 PSPHP1O15172 72 aa3.82□□□□□ -1.8
C1orf56-202ENST00000465135 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
C1orf56-202ENST00000465135 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
C1orf56-202ENST00000465135 MT1LQ93083 61 aa3.79□□□□□ -1.8
C1orf56-202ENST00000465135 MT1GP13640 62 aa3.77□□□□□ -1.81
C1orf56-202ENST00000465135 Q1T7F1 81 aa3.76□□□□□ -1.81
C1orf56-202ENST00000465135 MT1MQ8N339 61 aa3.76□□□□□ -1.81
C1orf56-202ENST00000465135 V9GYY9 64 aa3.74□□□□□ -1.81
C1orf56-202ENST00000465135 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
C1orf56-202ENST00000465135 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
C1orf56-202ENST00000465135 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
C1orf56-202ENST00000465135 K7ERS5 55 aa3.68□□□□□ -1.82
C1orf56-202ENST00000465135 A6NED7 52 aa3.65□□□□□ -1.83
C1orf56-202ENST00000465135 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
C1orf56-202ENST00000465135 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
C1orf56-202ENST00000465135 MT4P47944 62 aa3.57□□□□□ -1.84
C1orf56-202ENST00000465135 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
C1orf56-202ENST00000465135 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
C1orf56-202ENST00000465135 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
C1orf56-202ENST00000465135 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
C1orf56-202ENST00000465135 ROMO1P60602 79 aa3.48□□□□□ -1.85
C1orf56-202ENST00000465135 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
C1orf56-202ENST00000465135 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
C1orf56-202ENST00000465135 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
C1orf56-202ENST00000465135 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
C1orf56-202ENST00000465135 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
C1orf56-202ENST00000465135 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
C1orf56-202ENST00000465135 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
C1orf56-202ENST00000465135 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
C1orf56-202ENST00000465135 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
C1orf56-202ENST00000465135 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
C1orf56-202ENST00000465135 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
C1orf56-202ENST00000465135 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
C1orf56-202ENST00000465135 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
C1orf56-202ENST00000465135 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
C1orf56-202ENST00000465135 MT1AP04731 61 aa3.21□□□□□ -1.9
C1orf56-202ENST00000465135 BRK1Q8WUW1 75 aa3.21□□□□□ -1.9
C1orf56-202ENST00000465135 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
C1orf56-202ENST00000465135 MT3P25713 68 aa3.12□□□□□ -1.91
C1orf56-202ENST00000465135 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
C1orf56-202ENST00000465135 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
C1orf56-202ENST00000465135 PRO0628Q9UI54 55 aa3.08□□□□□ -1.92
C1orf56-202ENST00000465135 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
C1orf56-202ENST00000465135 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
C1orf56-202ENST00000465135 PMAIP1Q13794 54 aa3□□□□□ -1.93
C1orf56-202ENST00000465135 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
C1orf56-202ENST00000465135 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
C1orf56-202ENST00000465135 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
C1orf56-202ENST00000465135 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
C1orf56-202ENST00000465135 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
C1orf56-202ENST00000465135 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
C1orf56-202ENST00000465135 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
C1orf56-202ENST00000465135 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
C1orf56-202ENST00000465135 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
C1orf56-202ENST00000465135 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
C1orf56-202ENST00000465135 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
C1orf56-202ENST00000465135 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
C1orf56-202ENST00000465135 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
C1orf56-202ENST00000465135 LUZP6Q538Z0 58 aa2.39□□□□□ -2.03
C1orf56-202ENST00000465135 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
C1orf56-202ENST00000465135 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
C1orf56-202ENST00000465135 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
C1orf56-202ENST00000465135 INE1O15225 51 aa1.84□□□□□ -2.11
C1orf56-202ENST00000465135 PRM1P04553 51 aa1.81□□□□□ -2.12
C1orf56-202ENST00000465135 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
C1orf56-202ENST00000465135 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
C1orf56-202ENST00000465135 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 47.8 ms