RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
HOXB3-204ENST00000465120 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
HOXB3-204ENST00000465120 A0A0A0MQY5 61 aa5.7□□□□□ -1.5
HOXB3-204ENST00000465120 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
HOXB3-204ENST00000465120 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
HOXB3-204ENST00000465120 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
HOXB3-204ENST00000465120 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
HOXB3-204ENST00000465120 MT1GP13640 62 aa5.6□□□□□ -1.51
HOXB3-204ENST00000465120 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
HOXB3-204ENST00000465120 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
HOXB3-204ENST00000465120 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
HOXB3-204ENST00000465120 ROMO1P60602 79 aa5.49□□□□□ -1.53
HOXB3-204ENST00000465120 MT1MQ8N339 61 aa5.49□□□□□ -1.53
HOXB3-204ENST00000465120 MT4P47944 62 aa5.47□□□□□ -1.53
HOXB3-204ENST00000465120 MT1LQ93083 61 aa5.47□□□□□ -1.53
HOXB3-204ENST00000465120 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
HOXB3-204ENST00000465120 TNP1P09430 55 aa5.44□□□□□ -1.54
HOXB3-204ENST00000465120 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
HOXB3-204ENST00000465120 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
HOXB3-204ENST00000465120 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
HOXB3-204ENST00000465120 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
HOXB3-204ENST00000465120 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
HOXB3-204ENST00000465120 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
HOXB3-204ENST00000465120 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
HOXB3-204ENST00000465120 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
HOXB3-204ENST00000465120 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
HOXB3-204ENST00000465120 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
HOXB3-204ENST00000465120 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
HOXB3-204ENST00000465120 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
HOXB3-204ENST00000465120 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
HOXB3-204ENST00000465120 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
HOXB3-204ENST00000465120 KRTAP5-10Q6L8G5 202 aa5.16□□□□□ -1.58
HOXB3-204ENST00000465120 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
HOXB3-204ENST00000465120 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
HOXB3-204ENST00000465120 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
HOXB3-204ENST00000465120 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-204ENST00000465120 KRTAP12-4P60329 112 aa5□□□□□ -1.61
HOXB3-204ENST00000465120 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
HOXB3-204ENST00000465120 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
HOXB3-204ENST00000465120 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
HOXB3-204ENST00000465120 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
HOXB3-204ENST00000465120 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
HOXB3-204ENST00000465120 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
HOXB3-204ENST00000465120 MT1AP04731 61 aa4.65□□□□□ -1.67
HOXB3-204ENST00000465120 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
HOXB3-204ENST00000465120 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
HOXB3-204ENST00000465120 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
HOXB3-204ENST00000465120 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
HOXB3-204ENST00000465120 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
HOXB3-204ENST00000465120 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
HOXB3-204ENST00000465120 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
HOXB3-204ENST00000465120 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
HOXB3-204ENST00000465120 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
HOXB3-204ENST00000465120 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
HOXB3-204ENST00000465120 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
HOXB3-204ENST00000465120 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
HOXB3-204ENST00000465120 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
HOXB3-204ENST00000465120 MT3P25713 68 aa4.29□□□□□ -1.72
HOXB3-204ENST00000465120 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
HOXB3-204ENST00000465120 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
HOXB3-204ENST00000465120 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
HOXB3-204ENST00000465120 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
HOXB3-204ENST00000465120 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
HOXB3-204ENST00000465120 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
HOXB3-204ENST00000465120 INE1O15225 51 aa3.57□□□□□ -1.84
HOXB3-204ENST00000465120 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
HOXB3-204ENST00000465120 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
HOXB3-204ENST00000465120 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
HOXB3-204ENST00000465120 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
HOXB3-204ENST00000465120 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HOXB3-204ENST00000465120 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
HOXB3-204ENST00000465120 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
HOXB3-204ENST00000465120 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
HOXB3-204ENST00000465120 PRM1P04553 51 aa2.81□□□□□ -1.96
HOXB3-204ENST00000465120 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
HOXB3-204ENST00000465120 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
HOXB3-204ENST00000465120 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 80 ms