RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
UBR4-209ENST00000465036 ETDBQ3ZM63 59 aa1.79□□□□□ -2.12
UBR4-209ENST00000465036 Q5VV11 94 aa1.79□□□□□ -2.12
UBR4-209ENST00000465036 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
UBR4-209ENST00000465036 UBL5Q9BZL1 73 aa1.78□□□□□ -2.12
UBR4-209ENST00000465036 TRAV22A0A0B4J277 110 aa1.77□□□□□ -2.13
UBR4-209ENST00000465036 CYSTM1Q9H1C7 97 aa1.77□□□□□ -2.13
UBR4-209ENST00000465036 H7BZZ5 65 aa1.75□□□□□ -2.13
UBR4-209ENST00000465036 H1FX-AS1Q4G0G2 97 aa1.75□□□□□ -2.13
UBR4-209ENST00000465036 LINC00208Q96KT6 92 aa1.75□□□□□ -2.13
UBR4-209ENST00000465036 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
UBR4-209ENST00000465036 KLKP1Q107X0 134 aa1.74□□□□□ -2.13
UBR4-209ENST00000465036 A0A087WVE0 104 aa1.72□□□□□ -2.13
UBR4-209ENST00000465036 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
UBR4-209ENST00000465036 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
UBR4-209ENST00000465036 ACYP1P07311 99 aa1.7□□□□□ -2.14
UBR4-209ENST00000465036 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
UBR4-209ENST00000465036 KMT2DO14686 5537 aa1.7□□□□□ -2.14
UBR4-209ENST00000465036 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
UBR4-209ENST00000465036 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
UBR4-209ENST00000465036 ATP5EP2Q5VTU8 51 aa1.69□□□□□ -2.14
UBR4-209ENST00000465036 S4R3F8 94 aa1.69□□□□□ -2.14
UBR4-209ENST00000465036 H0Y9P7 68 aa1.68□□□□□ -2.14
UBR4-209ENST00000465036 LINC00643Q86TS7 51 aa1.68□□□□□ -2.14
UBR4-209ENST00000465036 MT1BP07438 61 aa1.66□□□□□ -2.14
UBR4-209ENST00000465036 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
UBR4-209ENST00000465036 LINC01558Q9Y6Z2 57 aa1.66□□□□□ -2.14
UBR4-209ENST00000465036 UQCR11O14957 56 aa1.65□□□□□ -2.15
UBR4-209ENST00000465036 ACYP2P14621 99 aa1.65□□□□□ -2.15
UBR4-209ENST00000465036 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
UBR4-209ENST00000465036 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
UBR4-209ENST00000465036 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
UBR4-209ENST00000465036 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
UBR4-209ENST00000465036 NEBP20929 6669 aa1.63□□□□□ -2.15
UBR4-209ENST00000465036 H0YAA0 97 aa1.6□□□□□ -2.15
UBR4-209ENST00000465036 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
UBR4-209ENST00000465036 PLAC4Q8WY50 150 aa1.57□□□□□ -2.16
UBR4-209ENST00000465036 MT1XP80297 61 aa1.56□□□□□ -2.16
UBR4-209ENST00000465036 M0QZ58 72 aa1.55□□□□□ -2.16
UBR4-209ENST00000465036 SPRR2FQ96RM1 72 aa1.49□□□□□ -2.17
UBR4-209ENST00000465036 SPATA8Q6RVD6 105 aa1.48□□□□□ -2.17
UBR4-209ENST00000465036 KRTAP8-1Q8IUC2 63 aa1.48□□□□□ -2.17
UBR4-209ENST00000465036 SPRR2EP22531 72 aa1.46□□□□□ -2.18
UBR4-209ENST00000465036 SPRR2BP35325 72 aa1.46□□□□□ -2.18
UBR4-209ENST00000465036 SPRR2AP35326 72 aa1.46□□□□□ -2.18
UBR4-209ENST00000465036 A0A0D9SG42 100 aa1.45□□□□□ -2.18
UBR4-209ENST00000465036 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
UBR4-209ENST00000465036 A0A1B0GU69 56 aa1.42□□□□□ -2.18
UBR4-209ENST00000465036 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
UBR4-209ENST00000465036 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
UBR4-209ENST00000465036 SPRR2DP22532 72 aa1.41□□□□□ -2.18
UBR4-209ENST00000465036 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
UBR4-209ENST00000465036 MT1EP04732 61 aa1.38□□□□□ -2.19
UBR4-209ENST00000465036 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
UBR4-209ENST00000465036 DSTQ03001 7570 aaKnown RBP1.38□□□□□ -2.19
UBR4-209ENST00000465036 KRTAP19-5Q3LI72 72 aa1.37□□□□□ -2.19
UBR4-209ENST00000465036 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
UBR4-209ENST00000465036 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
UBR4-209ENST00000465036 MT1LQ93083 61 aa1.32□□□□□ -2.2
UBR4-209ENST00000465036 GPR98Q8WXG9 6306 aa1.32□□□□□ -2.2
UBR4-209ENST00000465036 TNP1P09430 55 aa1.31□□□□□ -2.2
UBR4-209ENST00000465036 MT1MQ8N339 61 aa1.31□□□□□ -2.2
UBR4-209ENST00000465036 MT1GP13640 62 aa1.3□□□□□ -2.2
UBR4-209ENST00000465036 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
UBR4-209ENST00000465036 MT4P47944 62 aa1.25□□□□□ -2.21
UBR4-209ENST00000465036 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
UBR4-209ENST00000465036 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
UBR4-209ENST00000465036 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
UBR4-209ENST00000465036 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
UBR4-209ENST00000465036 MT1AP04731 61 aa1.11□□□□□ -2.23
UBR4-209ENST00000465036 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
UBR4-209ENST00000465036 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
UBR4-209ENST00000465036 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
UBR4-209ENST00000465036 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
UBR4-209ENST00000465036 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
UBR4-209ENST00000465036 PRM1P04553 51 aa0.69□□□□□ -2.3
UBR4-209ENST00000465036 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
UBR4-209ENST00000465036 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 44.3 ms