RNA–Protein interactions for RNA: ENST00000464886.1

CGN-204, Transcript of cingulin, humanhuman

TSL 3

Gene CGN, Length 373 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-204ENST00000464886 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
CGN-204ENST00000464886 MT1GP13640 62 aa4.6□□□□□ -1.67
CGN-204ENST00000464886 MT1LQ93083 61 aa4.57□□□□□ -1.68
CGN-204ENST00000464886 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CGN-204ENST00000464886 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CGN-204ENST00000464886 NEBP20929 6669 aa4.55□□□□□ -1.68
CGN-204ENST00000464886 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
CGN-204ENST00000464886 SPRR2DP22532 72 aa4.53□□□□□ -1.68
CGN-204ENST00000464886 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
CGN-204ENST00000464886 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
CGN-204ENST00000464886 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
CGN-204ENST00000464886 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CGN-204ENST00000464886 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CGN-204ENST00000464886 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CGN-204ENST00000464886 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
CGN-204ENST00000464886 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
CGN-204ENST00000464886 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CGN-204ENST00000464886 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CGN-204ENST00000464886 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
CGN-204ENST00000464886 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
CGN-204ENST00000464886 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CGN-204ENST00000464886 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
CGN-204ENST00000464886 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
CGN-204ENST00000464886 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
CGN-204ENST00000464886 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CGN-204ENST00000464886 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
CGN-204ENST00000464886 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
CGN-204ENST00000464886 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
CGN-204ENST00000464886 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CGN-204ENST00000464886 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
CGN-204ENST00000464886 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
CGN-204ENST00000464886 MT1AP04731 61 aa3.91□□□□□ -1.78
CGN-204ENST00000464886 MT4P47944 62 aa3.9□□□□□ -1.79
CGN-204ENST00000464886 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
CGN-204ENST00000464886 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CGN-204ENST00000464886 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
CGN-204ENST00000464886 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CGN-204ENST00000464886 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
CGN-204ENST00000464886 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
CGN-204ENST00000464886 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CGN-204ENST00000464886 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
CGN-204ENST00000464886 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
CGN-204ENST00000464886 MT3P25713 68 aa3.6□□□□□ -1.83
CGN-204ENST00000464886 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
CGN-204ENST00000464886 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CGN-204ENST00000464886 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
CGN-204ENST00000464886 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CGN-204ENST00000464886 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CGN-204ENST00000464886 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
CGN-204ENST00000464886 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CGN-204ENST00000464886 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
CGN-204ENST00000464886 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CGN-204ENST00000464886 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
CGN-204ENST00000464886 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
CGN-204ENST00000464886 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
CGN-204ENST00000464886 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
CGN-204ENST00000464886 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CGN-204ENST00000464886 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
CGN-204ENST00000464886 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CGN-204ENST00000464886 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CGN-204ENST00000464886 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CGN-204ENST00000464886 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
CGN-204ENST00000464886 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
CGN-204ENST00000464886 INE1O15225 51 aa2.91□□□□□ -1.94
CGN-204ENST00000464886 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
CGN-204ENST00000464886 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
CGN-204ENST00000464886 H3BS24 57 aa2.71□□□□□ -1.98
CGN-204ENST00000464886 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
CGN-204ENST00000464886 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CGN-204ENST00000464886 PRM1P04553 51 aa2.54□□□□□ -2
CGN-204ENST00000464886 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
CGN-204ENST00000464886 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
CGN-204ENST00000464886 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
CGN-204ENST00000464886 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CGN-204ENST00000464886 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
CGN-204ENST00000464886 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CGN-204ENST00000464886 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CGN-204ENST00000464886 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms