RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SQSTM1-205ENST00000464493 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SQSTM1-205ENST00000464493 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
SQSTM1-205ENST00000464493 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SQSTM1-205ENST00000464493 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
SQSTM1-205ENST00000464493 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
SQSTM1-205ENST00000464493 MT1GP13640 62 aa5.2□□□□□ -1.58
SQSTM1-205ENST00000464493 MT1LQ93083 61 aa5.18□□□□□ -1.58
SQSTM1-205ENST00000464493 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
SQSTM1-205ENST00000464493 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
SQSTM1-205ENST00000464493 ROMO1P60602 79 aa5.11□□□□□ -1.59
SQSTM1-205ENST00000464493 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SQSTM1-205ENST00000464493 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SQSTM1-205ENST00000464493 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
SQSTM1-205ENST00000464493 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
SQSTM1-205ENST00000464493 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
SQSTM1-205ENST00000464493 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
SQSTM1-205ENST00000464493 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
SQSTM1-205ENST00000464493 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
SQSTM1-205ENST00000464493 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
SQSTM1-205ENST00000464493 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
SQSTM1-205ENST00000464493 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
SQSTM1-205ENST00000464493 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
SQSTM1-205ENST00000464493 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
SQSTM1-205ENST00000464493 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
SQSTM1-205ENST00000464493 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
SQSTM1-205ENST00000464493 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
SQSTM1-205ENST00000464493 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
SQSTM1-205ENST00000464493 MT4P47944 62 aa4.7□□□□□ -1.66
SQSTM1-205ENST00000464493 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
SQSTM1-205ENST00000464493 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
SQSTM1-205ENST00000464493 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
SQSTM1-205ENST00000464493 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
SQSTM1-205ENST00000464493 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
SQSTM1-205ENST00000464493 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
SQSTM1-205ENST00000464493 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
SQSTM1-205ENST00000464493 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
SQSTM1-205ENST00000464493 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
SQSTM1-205ENST00000464493 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
SQSTM1-205ENST00000464493 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SQSTM1-205ENST00000464493 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
SQSTM1-205ENST00000464493 MT1AP04731 61 aa4.4□□□□□ -1.71
SQSTM1-205ENST00000464493 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SQSTM1-205ENST00000464493 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
SQSTM1-205ENST00000464493 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
SQSTM1-205ENST00000464493 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
SQSTM1-205ENST00000464493 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
SQSTM1-205ENST00000464493 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
SQSTM1-205ENST00000464493 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SQSTM1-205ENST00000464493 MT3P25713 68 aa4.03□□□□□ -1.76
SQSTM1-205ENST00000464493 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
SQSTM1-205ENST00000464493 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SQSTM1-205ENST00000464493 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
SQSTM1-205ENST00000464493 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
SQSTM1-205ENST00000464493 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SQSTM1-205ENST00000464493 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
SQSTM1-205ENST00000464493 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
SQSTM1-205ENST00000464493 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
SQSTM1-205ENST00000464493 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SQSTM1-205ENST00000464493 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
SQSTM1-205ENST00000464493 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
SQSTM1-205ENST00000464493 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
SQSTM1-205ENST00000464493 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
SQSTM1-205ENST00000464493 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
SQSTM1-205ENST00000464493 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SQSTM1-205ENST00000464493 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SQSTM1-205ENST00000464493 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SQSTM1-205ENST00000464493 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SQSTM1-205ENST00000464493 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
SQSTM1-205ENST00000464493 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SQSTM1-205ENST00000464493 INE1O15225 51 aa2.9□□□□□ -1.95
SQSTM1-205ENST00000464493 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SQSTM1-205ENST00000464493 PRM1P04553 51 aa2.63□□□□□ -1.99
SQSTM1-205ENST00000464493 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
SQSTM1-205ENST00000464493 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SQSTM1-205ENST00000464493 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SQSTM1-205ENST00000464493 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SQSTM1-205ENST00000464493 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms