RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 VPS13CQ709C8 3753 aa-0.19□□□□□ -2.44
USP25-207ENST00000464435 ATMQ13315 3056 aa-0.21□□□□□ -2.44
USP25-207ENST00000464435 H3BSH0 61 aa-0.21□□□□□ -2.44
USP25-207ENST00000464435 DEFB4AO15263 64 aa-0.21□□□□□ -2.44
USP25-207ENST00000464435 PRUNE2Q8WUY3 3088 aa-0.22□□□□□ -2.44
USP25-207ENST00000464435 FRYLO94915 3013 aa-0.22□□□□□ -2.44
USP25-207ENST00000464435 ITPR2Q14571 2701 aa-0.22□□□□□ -2.44
USP25-207ENST00000464435 H3BUX3 64 aa-0.22□□□□□ -2.44
USP25-207ENST00000464435 HTN1P15515 57 aa-0.22□□□□□ -2.44
USP25-207ENST00000464435 DNAH5Q8TE73 4624 aa-0.23□□□□□ -2.45
USP25-207ENST00000464435 EPPK1P58107 5090 aaKnown RBP-0.23□□□□□ -2.45
USP25-207ENST00000464435 CEP295Q9C0D2 2601 aa-0.23□□□□□ -2.45
USP25-207ENST00000464435 DEFB124Q8NES8 71 aa-0.23□□□□□ -2.45
USP25-207ENST00000464435 DMDP11532 3685 aa-0.23□□□□□ -2.45
USP25-207ENST00000464435 DEFB133Q30KQ1 61 aa-0.24□□□□□ -2.45
USP25-207ENST00000464435 EYSQ5T1H1 3165 aa-0.25□□□□□ -2.45
USP25-207ENST00000464435 MT4P47944 62 aa-0.25□□□□□ -2.45
USP25-207ENST00000464435 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
USP25-207ENST00000464435 TMEM167AQ8TBQ9 72 aa-0.25□□□□□ -2.45
USP25-207ENST00000464435 HERC2O95714 4834 aa-0.26□□□□□ -2.45
USP25-207ENST00000464435 MUC3AQ02505 3323 aa-0.3□□□□□ -2.46
USP25-207ENST00000464435 MYO15AQ9UKN7 3530 aa-0.3□□□□□ -2.46
USP25-207ENST00000464435 WDFY4Q6ZS81 3184 aa-0.31□□□□□ -2.46
USP25-207ENST00000464435 NEBP20929 6669 aa-0.32□□□□□ -2.46
USP25-207ENST00000464435 BIRC6Q9NR09 4857 aa-0.33□□□□□ -2.46
USP25-207ENST00000464435 MT1GP13640 62 aa-0.33□□□□□ -2.46
USP25-207ENST00000464435 DNAH12Q6ZR08 3092 aa-0.33□□□□□ -2.46
USP25-207ENST00000464435 RNF213Q63HN8 5207 aa-0.34□□□□□ -2.46
USP25-207ENST00000464435 RPS29P62273 56 aaKnown RBP-0.34□□□□□ -2.46
USP25-207ENST00000464435 RPL39P5Q59GN2 51 aa-0.35□□□□□ -2.47
USP25-207ENST00000464435 XIRP2A4UGR9 3374 aa-0.36□□□□□ -2.47
USP25-207ENST00000464435 MT1HL1P0DM35 61 aa-0.36□□□□□ -2.47
USP25-207ENST00000464435 CD52P31358 61 aa-0.36□□□□□ -2.47
USP25-207ENST00000464435 PCNTO95613 3336 aa-0.38□□□□□ -2.47
USP25-207ENST00000464435 SZT2Q5T011 3432 aa-0.39□□□□□ -2.47
USP25-207ENST00000464435 MT2AP02795 61 aa-0.39□□□□□ -2.47
USP25-207ENST00000464435 MT1MQ8N339 61 aa-0.39□□□□□ -2.47
USP25-207ENST00000464435 CENPEQ02224 2701 aa-0.4□□□□□ -2.47
USP25-207ENST00000464435 FREM2Q5SZK8 3169 aa-0.41□□□□□ -2.47
USP25-207ENST00000464435 MKI67P46013 3256 aaKnown RBP-0.41□□□□□ -2.48
USP25-207ENST00000464435 DEFB108AA8MXU0 73 aa-0.42□□□□□ -2.48
USP25-207ENST00000464435 CEP350Q5VT06 3117 aa-0.42□□□□□ -2.48
USP25-207ENST00000464435 WDFY3Q8IZQ1 3526 aa-0.43□□□□□ -2.48
USP25-207ENST00000464435 DCHS1Q96JQ0 3298 aa-0.44□□□□□ -2.48
USP25-207ENST00000464435 HYDINQ4G0P3 5121 aa-0.44□□□□□ -2.48
USP25-207ENST00000464435 KIAA1109Q2LD37 5005 aa-0.45□□□□□ -2.48
USP25-207ENST00000464435 BOD1L1Q8NFC6 3051 aa-0.46□□□□□ -2.48
USP25-207ENST00000464435 RYR3Q15413 4870 aa-0.47□□□□□ -2.48
USP25-207ENST00000464435 RYR2Q92736 4967 aa-0.48□□□□□ -2.49
USP25-207ENST00000464435 APELAP0DMC3 54 aa-0.49□□□□□ -2.49
USP25-207ENST00000464435 LINC01556Q5JQF7 62 aa-0.52□□□□□ -2.49
USP25-207ENST00000464435 LOC400499M0QZD8 3231 aa-0.53□□□□□ -2.49
USP25-207ENST00000464435 ASPMQ8IZT6 3477 aa-0.55□□□□□ -2.5
USP25-207ENST00000464435 USP34Q70CQ2 3546 aa-0.57□□□□□ -2.5
USP25-207ENST00000464435 A0A096LPF7 62 aa-0.57□□□□□ -2.5
USP25-207ENST00000464435 MT1BP07438 61 aa-0.58□□□□□ -2.5
USP25-207ENST00000464435 EP400Q96L91 3159 aa-0.59□□□□□ -2.5
USP25-207ENST00000464435 SPEGQ15772 3267 aa-0.59□□□□□ -2.5
USP25-207ENST00000464435 ABCA13Q86UQ4 5058 aa-0.65□□□□□ -2.51
USP25-207ENST00000464435 UNC80Q8N2C7 3258 aa-0.66□□□□□ -2.51
USP25-207ENST00000464435 Q9Y3F1 56 aa-0.67□□□□□ -2.52
USP25-207ENST00000464435 CFAP47Q6ZTR5 3102 aa-0.68□□□□□ -2.52
USP25-207ENST00000464435 MT1FP04733 61 aa-0.68□□□□□ -2.52
USP25-207ENST00000464435 BRCA2P51587 3418 aa-0.69□□□□□ -2.52
USP25-207ENST00000464435 VCANP13611 3396 aa-0.75□□□□□ -2.53
USP25-207ENST00000464435 HTN3P15516 51 aa-0.77□□□□□ -2.53
USP25-207ENST00000464435 DNAH14Q0VDD8 3507 aa-0.78□□□□□ -2.53
USP25-207ENST00000464435 CENPFP49454 3210 aa-0.8□□□□□ -2.54
USP25-207ENST00000464435 UTRNP46939 3433 aa-0.81□□□□□ -2.54
USP25-207ENST00000464435 DEFB108BQ8NET1 73 aa-0.81□□□□□ -2.54
USP25-207ENST00000464435 KRTAP20-1Q3LI63 56 aa-0.82□□□□□ -2.54
USP25-207ENST00000464435 KRTAP19-2Q3LHN2 52 aa-0.89□□□□□ -2.55
USP25-207ENST00000464435 COX14Q96I36 57 aa-0.9□□□□□ -2.55
USP25-207ENST00000464435 VPS13AQ96RL7 3174 aa-0.91□□□□□ -2.55
USP25-207ENST00000464435 KRTAP19-6Q3LI70 58 aa-0.91□□□□□ -2.56
USP25-207ENST00000464435 CDH23Q9H251 3354 aa-0.93□□□□□ -2.56
USP25-207ENST00000464435 STATHP02808 62 aa-0.94□□□□□ -2.56
USP25-207ENST00000464435 GOLGB1Q14789 3259 aaKnown RBP-0.96□□□□□ -2.56
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms