RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
HMG20B-208ENST00000464304 SPRR2DP22532 72 aa7.16□□□□□ -1.26
HMG20B-208ENST00000464304 TNP1P09430 55 aa7.11□□□□□ -1.27
HMG20B-208ENST00000464304 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
HMG20B-208ENST00000464304 KRTAP9-4Q9BYQ2 154 aa7.04□□□□□ -1.28
HMG20B-208ENST00000464304 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
HMG20B-208ENST00000464304 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
HMG20B-208ENST00000464304 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
HMG20B-208ENST00000464304 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
HMG20B-208ENST00000464304 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
HMG20B-208ENST00000464304 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
HMG20B-208ENST00000464304 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
HMG20B-208ENST00000464304 MT1EP04732 61 aa6.95□□□□□ -1.3
HMG20B-208ENST00000464304 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
HMG20B-208ENST00000464304 ROMO1P60602 79 aa6.92□□□□□ -1.3
HMG20B-208ENST00000464304 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
HMG20B-208ENST00000464304 KRTAP4-12Q9BQ66 201 aa6.83□□□□□ -1.32
HMG20B-208ENST00000464304 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
HMG20B-208ENST00000464304 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
HMG20B-208ENST00000464304 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
HMG20B-208ENST00000464304 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
HMG20B-208ENST00000464304 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
HMG20B-208ENST00000464304 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
HMG20B-208ENST00000464304 MT1LQ93083 61 aa6.7□□□□□ -1.34
HMG20B-208ENST00000464304 MT1GP13640 62 aa6.68□□□□□ -1.34
HMG20B-208ENST00000464304 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
HMG20B-208ENST00000464304 PMAIP1Q13794 54 aa6.67□□□□□ -1.34
HMG20B-208ENST00000464304 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
HMG20B-208ENST00000464304 MT1MQ8N339 61 aa6.6□□□□□ -1.35
HMG20B-208ENST00000464304 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
HMG20B-208ENST00000464304 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
HMG20B-208ENST00000464304 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
HMG20B-208ENST00000464304 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
HMG20B-208ENST00000464304 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
HMG20B-208ENST00000464304 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
HMG20B-208ENST00000464304 MT4P47944 62 aa6.37□□□□□ -1.39
HMG20B-208ENST00000464304 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
HMG20B-208ENST00000464304 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
HMG20B-208ENST00000464304 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
HMG20B-208ENST00000464304 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.42
HMG20B-208ENST00000464304 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
HMG20B-208ENST00000464304 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
HMG20B-208ENST00000464304 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
HMG20B-208ENST00000464304 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
HMG20B-208ENST00000464304 MT3P25713 68 aa5.9□□□□□ -1.46
HMG20B-208ENST00000464304 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
HMG20B-208ENST00000464304 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
HMG20B-208ENST00000464304 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
HMG20B-208ENST00000464304 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
HMG20B-208ENST00000464304 MT1AP04731 61 aa5.71□□□□□ -1.5
HMG20B-208ENST00000464304 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
HMG20B-208ENST00000464304 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
HMG20B-208ENST00000464304 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
HMG20B-208ENST00000464304 LCE1FQ5T754 118 aa5.55□□□□□ -1.52
HMG20B-208ENST00000464304 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
HMG20B-208ENST00000464304 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
HMG20B-208ENST00000464304 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
HMG20B-208ENST00000464304 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
HMG20B-208ENST00000464304 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
HMG20B-208ENST00000464304 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
HMG20B-208ENST00000464304 MUC5BQ9HC84 5762 aaPredicted RBP5.29□□□□□ -1.56
HMG20B-208ENST00000464304 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
HMG20B-208ENST00000464304 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
HMG20B-208ENST00000464304 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
HMG20B-208ENST00000464304 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
HMG20B-208ENST00000464304 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
HMG20B-208ENST00000464304 INE1O15225 51 aa4.44□□□□□ -1.7
HMG20B-208ENST00000464304 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
HMG20B-208ENST00000464304 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
HMG20B-208ENST00000464304 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
HMG20B-208ENST00000464304 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
HMG20B-208ENST00000464304 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
HMG20B-208ENST00000464304 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
HMG20B-208ENST00000464304 PRM1P04553 51 aa3.54□□□□□ -1.84
HMG20B-208ENST00000464304 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
HMG20B-208ENST00000464304 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
HMG20B-208ENST00000464304 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
HMG20B-208ENST00000464304 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 143.8 ms