RNA–Protein interactions for RNA: ENST00000463423.5

CTPS1-204, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-204ENST00000463423 K7ERS5 55 aa2.37□□□□□ -2.03
CTPS1-204ENST00000463423 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
CTPS1-204ENST00000463423 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
CTPS1-204ENST00000463423 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
CTPS1-204ENST00000463423 TNP1P09430 55 aa2.34□□□□□ -2.03
CTPS1-204ENST00000463423 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
CTPS1-204ENST00000463423 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
CTPS1-204ENST00000463423 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
CTPS1-204ENST00000463423 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CTPS1-204ENST00000463423 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
CTPS1-204ENST00000463423 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
CTPS1-204ENST00000463423 KMT2DO14686 5537 aa2.26□□□□□ -2.05
CTPS1-204ENST00000463423 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
CTPS1-204ENST00000463423 SPRR2EP22531 72 aa2.24□□□□□ -2.05
CTPS1-204ENST00000463423 SPRR2BP35325 72 aa2.24□□□□□ -2.05
CTPS1-204ENST00000463423 SPRR2AP35326 72 aa2.24□□□□□ -2.05
CTPS1-204ENST00000463423 ROMO1P60602 79 aa2.24□□□□□ -2.05
CTPS1-204ENST00000463423 MT1EP04732 61 aa2.23□□□□□ -2.05
CTPS1-204ENST00000463423 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
CTPS1-204ENST00000463423 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
CTPS1-204ENST00000463423 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
CTPS1-204ENST00000463423 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
CTPS1-204ENST00000463423 MT1GP13640 62 aa2.19□□□□□ -2.06
CTPS1-204ENST00000463423 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
CTPS1-204ENST00000463423 BRK1Q8WUW1 75 aa2.19□□□□□ -2.06
CTPS1-204ENST00000463423 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
CTPS1-204ENST00000463423 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
CTPS1-204ENST00000463423 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
CTPS1-204ENST00000463423 MT1LQ93083 61 aa2.17□□□□□ -2.06
CTPS1-204ENST00000463423 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
CTPS1-204ENST00000463423 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
CTPS1-204ENST00000463423 SPRR2DP22532 72 aa2.16□□□□□ -2.06
CTPS1-204ENST00000463423 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
CTPS1-204ENST00000463423 MT1MQ8N339 61 aa2.12□□□□□ -2.07
CTPS1-204ENST00000463423 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
CTPS1-204ENST00000463423 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
CTPS1-204ENST00000463423 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
CTPS1-204ENST00000463423 NEBP20929 6669 aa2.11□□□□□ -2.07
CTPS1-204ENST00000463423 PRO0628Q9UI54 55 aa2.09□□□□□ -2.07
CTPS1-204ENST00000463423 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
CTPS1-204ENST00000463423 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
CTPS1-204ENST00000463423 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
CTPS1-204ENST00000463423 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
CTPS1-204ENST00000463423 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
CTPS1-204ENST00000463423 MT3P25713 68 aa2.01□□□□□ -2.09
CTPS1-204ENST00000463423 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
CTPS1-204ENST00000463423 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
CTPS1-204ENST00000463423 KTN1-AS1Q86SY8 53 aa1.95□□□□□ -2.1
CTPS1-204ENST00000463423 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
CTPS1-204ENST00000463423 MT4P47944 62 aa1.86□□□□□ -2.11
CTPS1-204ENST00000463423 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
CTPS1-204ENST00000463423 MT1AP04731 61 aa1.85□□□□□ -2.11
CTPS1-204ENST00000463423 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
CTPS1-204ENST00000463423 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CTPS1-204ENST00000463423 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
CTPS1-204ENST00000463423 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
CTPS1-204ENST00000463423 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
CTPS1-204ENST00000463423 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
CTPS1-204ENST00000463423 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
CTPS1-204ENST00000463423 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
CTPS1-204ENST00000463423 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
CTPS1-204ENST00000463423 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
CTPS1-204ENST00000463423 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
CTPS1-204ENST00000463423 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
CTPS1-204ENST00000463423 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
CTPS1-204ENST00000463423 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
CTPS1-204ENST00000463423 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
CTPS1-204ENST00000463423 LCE3EQ5T5B0 92 aa1.44□□□□□ -2.18
CTPS1-204ENST00000463423 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
CTPS1-204ENST00000463423 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
CTPS1-204ENST00000463423 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
CTPS1-204ENST00000463423 INE1O15225 51 aa1.24□□□□□ -2.21
CTPS1-204ENST00000463423 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
CTPS1-204ENST00000463423 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
CTPS1-204ENST00000463423 PRM1P04553 51 aa1.13□□□□□ -2.23
CTPS1-204ENST00000463423 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
CTPS1-204ENST00000463423 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
CTPS1-204ENST00000463423 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms