RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 KRTAP19-3Q7Z4W3 81 aa8.24□□□□□ -1.09
PDLIM7-206ENST00000463411 TNP1P09430 55 aa8.23□□□□□ -1.09
PDLIM7-206ENST00000463411 DSTQ03001 7570 aaKnown RBP8.13□□□□□ -1.11
PDLIM7-206ENST00000463411 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
PDLIM7-206ENST00000463411 ROMO1P60602 79 aa8.11□□□□□ -1.11
PDLIM7-206ENST00000463411 KRTAP19-5Q3LI72 72 aa8.09□□□□□ -1.11
PDLIM7-206ENST00000463411 MT1GP13640 62 aa8.03□□□□□ -1.12
PDLIM7-206ENST00000463411 PP632Q6XCG6 107 aa8.03□□□□□ -1.12
PDLIM7-206ENST00000463411 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
PDLIM7-206ENST00000463411 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
PDLIM7-206ENST00000463411 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
PDLIM7-206ENST00000463411 PRO0628Q9UI54 55 aa7.9□□□□□ -1.14
PDLIM7-206ENST00000463411 GPR98Q8WXG9 6306 aa7.89□□□□□ -1.15
PDLIM7-206ENST00000463411 MT1MQ8N339 61 aa7.88□□□□□ -1.15
PDLIM7-206ENST00000463411 MT1LQ93083 61 aa7.87□□□□□ -1.15
PDLIM7-206ENST00000463411 PMAIP1Q13794 54 aa7.84□□□□□ -1.15
PDLIM7-206ENST00000463411 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
PDLIM7-206ENST00000463411 LCE4AQ5TA78 99 aa7.79□□□□□ -1.16
PDLIM7-206ENST00000463411 MT4P47944 62 aa7.72□□□□□ -1.17
PDLIM7-206ENST00000463411 KRTAP4-3Q9BYR4 195 aa7.67□□□□□ -1.18
PDLIM7-206ENST00000463411 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
PDLIM7-206ENST00000463411 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
PDLIM7-206ENST00000463411 KRTAP5-4Q6L8H1 288 aa7.58□□□□□ -1.2
PDLIM7-206ENST00000463411 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
PDLIM7-206ENST00000463411 KRTAP4-6Q9BYQ5 205 aa7.44□□□□□ -1.22
PDLIM7-206ENST00000463411 AHNAK2Q8IVF2 5795 aa7.4□□□□□ -1.22
PDLIM7-206ENST00000463411 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
PDLIM7-206ENST00000463411 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
PDLIM7-206ENST00000463411 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
PDLIM7-206ENST00000463411 PRAC1Q96KF2 57 aa7.34□□□□□ -1.23
PDLIM7-206ENST00000463411 KRTAP5-10Q6L8G5 202 aa7.3□□□□□ -1.24
PDLIM7-206ENST00000463411 KRTAP5-5Q701N2 237 aaPredicted RBP7.22□□□□□ -1.25
PDLIM7-206ENST00000463411 KRTAP20-2Q3LI61 65 aa7.18□□□□□ -1.26
PDLIM7-206ENST00000463411 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
PDLIM7-206ENST00000463411 KRTAP12-4P60329 112 aa7.13□□□□□ -1.27
PDLIM7-206ENST00000463411 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
PDLIM7-206ENST00000463411 KRTAP5-3Q6L8H2 238 aa7.12□□□□□ -1.27
PDLIM7-206ENST00000463411 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
PDLIM7-206ENST00000463411 KRTAP5-7Q6L8G8 165 aa7.05□□□□□ -1.28
PDLIM7-206ENST00000463411 SVIPQ8NHG7 77 aa6.91□□□□□ -1.3
PDLIM7-206ENST00000463411 SYNE1Q8NF91 8797 aaKnown RBP6.87□□□□□ -1.31
PDLIM7-206ENST00000463411 MT1AP04731 61 aa6.71□□□□□ -1.34
PDLIM7-206ENST00000463411 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
PDLIM7-206ENST00000463411 KRTAP6-1Q3LI64 71 aa6.65□□□□□ -1.34
PDLIM7-206ENST00000463411 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
PDLIM7-206ENST00000463411 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
PDLIM7-206ENST00000463411 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
PDLIM7-206ENST00000463411 KRTAP6-2Q3LI66 62 aa6.4□□□□□ -1.38
PDLIM7-206ENST00000463411 KRTAP5-8O75690 187 aa6.35□□□□□ -1.39
PDLIM7-206ENST00000463411 OBSCNQ5VST9 7968 aa6.17□□□□□ -1.42
PDLIM7-206ENST00000463411 MT3P25713 68 aa6.16□□□□□ -1.42
PDLIM7-206ENST00000463411 MUC5ACP98088 5654 aa6.14□□□□□ -1.43
PDLIM7-206ENST00000463411 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
PDLIM7-206ENST00000463411 AHNAKQ09666 5890 aaKnown RBP6.11□□□□□ -1.43
PDLIM7-206ENST00000463411 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
PDLIM7-206ENST00000463411 MUC5BQ9HC84 5762 aaPredicted RBP6.1□□□□□ -1.43
PDLIM7-206ENST00000463411 KRTAP5-1Q6L8H4 278 aa5.94□□□□□ -1.46
PDLIM7-206ENST00000463411 LCE1EQ5T753 118 aa5.68□□□□□ -1.5
PDLIM7-206ENST00000463411 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
PDLIM7-206ENST00000463411 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
PDLIM7-206ENST00000463411 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
PDLIM7-206ENST00000463411 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
PDLIM7-206ENST00000463411 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
PDLIM7-206ENST00000463411 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
PDLIM7-206ENST00000463411 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
PDLIM7-206ENST00000463411 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
PDLIM7-206ENST00000463411 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
PDLIM7-206ENST00000463411 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
PDLIM7-206ENST00000463411 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
PDLIM7-206ENST00000463411 INE1O15225 51 aa4.68□□□□□ -1.66
PDLIM7-206ENST00000463411 H3BS24 57 aa4.54□□□□□ -1.68
PDLIM7-206ENST00000463411 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
PDLIM7-206ENST00000463411 PHGR1C9JFL3 82 aa4.3□□□□□ -1.72
PDLIM7-206ENST00000463411 PRM1P04553 51 aa4.16□□□□□ -1.74
PDLIM7-206ENST00000463411 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
PDLIM7-206ENST00000463411 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
PDLIM7-206ENST00000463411 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
PDLIM7-206ENST00000463411 MUC16Q8WXI7 14507 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms