RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 A8MU10 97 aa4.88□□□□□ -1.63
HDAC1-203ENST00000463172 Q1T7F1 81 aa4.88□□□□□ -1.63
HDAC1-203ENST00000463172 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
HDAC1-203ENST00000463172 MT1EP04732 61 aa4.86□□□□□ -1.63
HDAC1-203ENST00000463172 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
HDAC1-203ENST00000463172 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
HDAC1-203ENST00000463172 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
HDAC1-203ENST00000463172 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
HDAC1-203ENST00000463172 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
HDAC1-203ENST00000463172 TNP1P09430 55 aa4.83□□□□□ -1.64
HDAC1-203ENST00000463172 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
HDAC1-203ENST00000463172 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
HDAC1-203ENST00000463172 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
HDAC1-203ENST00000463172 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
HDAC1-203ENST00000463172 UQCR11O14957 56 aa4.78□□□□□ -1.64
HDAC1-203ENST00000463172 MT1GP13640 62 aa4.76□□□□□ -1.65
HDAC1-203ENST00000463172 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
HDAC1-203ENST00000463172 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
HDAC1-203ENST00000463172 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
HDAC1-203ENST00000463172 K7ERS5 55 aa4.66□□□□□ -1.66
HDAC1-203ENST00000463172 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
HDAC1-203ENST00000463172 MT1LQ93083 61 aa4.65□□□□□ -1.67
HDAC1-203ENST00000463172 MT1MQ8N339 61 aa4.63□□□□□ -1.67
HDAC1-203ENST00000463172 CDC42SE1Q9NRR8 79 aa4.62□□□□□ -1.67
HDAC1-203ENST00000463172 PSPHP1O15172 72 aa4.61□□□□□ -1.67
HDAC1-203ENST00000463172 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
HDAC1-203ENST00000463172 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
HDAC1-203ENST00000463172 A6NED7 52 aa4.54□□□□□ -1.68
HDAC1-203ENST00000463172 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
HDAC1-203ENST00000463172 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
HDAC1-203ENST00000463172 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
HDAC1-203ENST00000463172 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
HDAC1-203ENST00000463172 MT4P47944 62 aa4.44□□□□□ -1.7
HDAC1-203ENST00000463172 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
HDAC1-203ENST00000463172 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
HDAC1-203ENST00000463172 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
HDAC1-203ENST00000463172 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
HDAC1-203ENST00000463172 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
HDAC1-203ENST00000463172 ROMO1P60602 79 aa4.25□□□□□ -1.73
HDAC1-203ENST00000463172 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
HDAC1-203ENST00000463172 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
HDAC1-203ENST00000463172 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
HDAC1-203ENST00000463172 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
HDAC1-203ENST00000463172 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
HDAC1-203ENST00000463172 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
HDAC1-203ENST00000463172 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
HDAC1-203ENST00000463172 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
HDAC1-203ENST00000463172 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
HDAC1-203ENST00000463172 MT1AP04731 61 aa3.98□□□□□ -1.77
HDAC1-203ENST00000463172 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
HDAC1-203ENST00000463172 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
HDAC1-203ENST00000463172 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
HDAC1-203ENST00000463172 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
HDAC1-203ENST00000463172 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
HDAC1-203ENST00000463172 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
HDAC1-203ENST00000463172 MT3P25713 68 aa3.68□□□□□ -1.82
HDAC1-203ENST00000463172 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
HDAC1-203ENST00000463172 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
HDAC1-203ENST00000463172 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
HDAC1-203ENST00000463172 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
HDAC1-203ENST00000463172 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
HDAC1-203ENST00000463172 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
HDAC1-203ENST00000463172 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
HDAC1-203ENST00000463172 INE1O15225 51 aa3.34□□□□□ -1.87
HDAC1-203ENST00000463172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
HDAC1-203ENST00000463172 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
HDAC1-203ENST00000463172 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
HDAC1-203ENST00000463172 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
HDAC1-203ENST00000463172 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
HDAC1-203ENST00000463172 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
HDAC1-203ENST00000463172 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
HDAC1-203ENST00000463172 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
HDAC1-203ENST00000463172 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
HDAC1-203ENST00000463172 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
HDAC1-203ENST00000463172 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
HDAC1-203ENST00000463172 PRM1P04553 51 aa2.14□□□□□ -2.07
HDAC1-203ENST00000463172 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
HDAC1-203ENST00000463172 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms