RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
TRAPPC3-205ENST00000462715 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
TRAPPC3-205ENST00000462715 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
TRAPPC3-205ENST00000462715 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
TRAPPC3-205ENST00000462715 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
TRAPPC3-205ENST00000462715 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
TRAPPC3-205ENST00000462715 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
TRAPPC3-205ENST00000462715 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
TRAPPC3-205ENST00000462715 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
TRAPPC3-205ENST00000462715 NEBP20929 6669 aa4.09□□□□□ -1.75
TRAPPC3-205ENST00000462715 SPRR2EP22531 72 aa4.04□□□□□ -1.76
TRAPPC3-205ENST00000462715 SPRR2BP35325 72 aa4.04□□□□□ -1.76
TRAPPC3-205ENST00000462715 SPRR2AP35326 72 aa4.04□□□□□ -1.76
TRAPPC3-205ENST00000462715 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
TRAPPC3-205ENST00000462715 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
TRAPPC3-205ENST00000462715 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
TRAPPC3-205ENST00000462715 MT1EP04732 61 aa3.97□□□□□ -1.77
TRAPPC3-205ENST00000462715 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
TRAPPC3-205ENST00000462715 SPRR2DP22532 72 aa3.91□□□□□ -1.78
TRAPPC3-205ENST00000462715 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
TRAPPC3-205ENST00000462715 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TRAPPC3-205ENST00000462715 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
TRAPPC3-205ENST00000462715 MT1GP13640 62 aa3.84□□□□□ -1.8
TRAPPC3-205ENST00000462715 MT1LQ93083 61 aa3.84□□□□□ -1.8
TRAPPC3-205ENST00000462715 LCE3BQ5TA77 95 aa3.78□□□□□ -1.81
TRAPPC3-205ENST00000462715 MT1MQ8N339 61 aa3.76□□□□□ -1.81
TRAPPC3-205ENST00000462715 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
TRAPPC3-205ENST00000462715 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
TRAPPC3-205ENST00000462715 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TRAPPC3-205ENST00000462715 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
TRAPPC3-205ENST00000462715 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
TRAPPC3-205ENST00000462715 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
TRAPPC3-205ENST00000462715 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
TRAPPC3-205ENST00000462715 MT1AP04731 61 aa3.48□□□□□ -1.85
TRAPPC3-205ENST00000462715 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
TRAPPC3-205ENST00000462715 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
TRAPPC3-205ENST00000462715 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC3-205ENST00000462715 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
TRAPPC3-205ENST00000462715 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
TRAPPC3-205ENST00000462715 MT4P47944 62 aa3.38□□□□□ -1.87
TRAPPC3-205ENST00000462715 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
TRAPPC3-205ENST00000462715 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
TRAPPC3-205ENST00000462715 PRM1P04553 51 aa3.33□□□□□ -1.88
TRAPPC3-205ENST00000462715 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TRAPPC3-205ENST00000462715 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
TRAPPC3-205ENST00000462715 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
TRAPPC3-205ENST00000462715 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
TRAPPC3-205ENST00000462715 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
TRAPPC3-205ENST00000462715 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
TRAPPC3-205ENST00000462715 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
TRAPPC3-205ENST00000462715 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
TRAPPC3-205ENST00000462715 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
TRAPPC3-205ENST00000462715 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
TRAPPC3-205ENST00000462715 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
TRAPPC3-205ENST00000462715 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
TRAPPC3-205ENST00000462715 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
TRAPPC3-205ENST00000462715 MT3P25713 68 aa3□□□□□ -1.93
TRAPPC3-205ENST00000462715 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
TRAPPC3-205ENST00000462715 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
TRAPPC3-205ENST00000462715 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
TRAPPC3-205ENST00000462715 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
TRAPPC3-205ENST00000462715 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
TRAPPC3-205ENST00000462715 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
TRAPPC3-205ENST00000462715 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
TRAPPC3-205ENST00000462715 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
TRAPPC3-205ENST00000462715 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TRAPPC3-205ENST00000462715 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TRAPPC3-205ENST00000462715 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
TRAPPC3-205ENST00000462715 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TRAPPC3-205ENST00000462715 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
TRAPPC3-205ENST00000462715 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC3-205ENST00000462715 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
TRAPPC3-205ENST00000462715 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
TRAPPC3-205ENST00000462715 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
TRAPPC3-205ENST00000462715 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
TRAPPC3-205ENST00000462715 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
TRAPPC3-205ENST00000462715 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
TRAPPC3-205ENST00000462715 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms