RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 UQCR11O14957 56 aa6.98□□□□□ -1.29
COL9A3-203ENST00000462700 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
COL9A3-203ENST00000462700 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
COL9A3-203ENST00000462700 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
COL9A3-203ENST00000462700 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
COL9A3-203ENST00000462700 TNP1P09430 55 aa6.92□□□□□ -1.3
COL9A3-203ENST00000462700 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
COL9A3-203ENST00000462700 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
COL9A3-203ENST00000462700 V9GYY9 64 aa6.83□□□□□ -1.32
COL9A3-203ENST00000462700 Q1T7F1 81 aa6.79□□□□□ -1.32
COL9A3-203ENST00000462700 PSPHP1O15172 72 aa6.78□□□□□ -1.32
COL9A3-203ENST00000462700 MT1GP13640 62 aa6.76□□□□□ -1.33
COL9A3-203ENST00000462700 MT1LQ93083 61 aa6.72□□□□□ -1.33
COL9A3-203ENST00000462700 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
COL9A3-203ENST00000462700 K7ERS5 55 aa6.67□□□□□ -1.34
COL9A3-203ENST00000462700 MT1MQ8N339 61 aa6.67□□□□□ -1.34
COL9A3-203ENST00000462700 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
COL9A3-203ENST00000462700 H3BS24 57 aa6.63□□□□□ -1.35
COL9A3-203ENST00000462700 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
COL9A3-203ENST00000462700 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
COL9A3-203ENST00000462700 A6NED7 52 aa6.56□□□□□ -1.36
COL9A3-203ENST00000462700 PCP4P48539 62 aa6.56□□□□□ -1.36
COL9A3-203ENST00000462700 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
COL9A3-203ENST00000462700 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
COL9A3-203ENST00000462700 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
COL9A3-203ENST00000462700 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
COL9A3-203ENST00000462700 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
COL9A3-203ENST00000462700 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
COL9A3-203ENST00000462700 MT4P47944 62 aa6.26□□□□□ -1.41
COL9A3-203ENST00000462700 ROMO1P60602 79 aa6.25□□□□□ -1.41
COL9A3-203ENST00000462700 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.41
COL9A3-203ENST00000462700 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
COL9A3-203ENST00000462700 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
COL9A3-203ENST00000462700 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
COL9A3-203ENST00000462700 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
COL9A3-203ENST00000462700 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
COL9A3-203ENST00000462700 SPRR5A0A1B0GTR4 108 aa5.89□□□□□ -1.47
COL9A3-203ENST00000462700 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
COL9A3-203ENST00000462700 KRTAP5-10Q6L8G5 202 aa5.8□□□□□ -1.48
COL9A3-203ENST00000462700 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
COL9A3-203ENST00000462700 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
COL9A3-203ENST00000462700 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
COL9A3-203ENST00000462700 MT1AP04731 61 aa5.72□□□□□ -1.49
COL9A3-203ENST00000462700 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
COL9A3-203ENST00000462700 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
COL9A3-203ENST00000462700 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
COL9A3-203ENST00000462700 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
COL9A3-203ENST00000462700 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
COL9A3-203ENST00000462700 MT3P25713 68 aa5.22□□□□□ -1.57
COL9A3-203ENST00000462700 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
COL9A3-203ENST00000462700 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
COL9A3-203ENST00000462700 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
COL9A3-203ENST00000462700 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
COL9A3-203ENST00000462700 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
COL9A3-203ENST00000462700 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
COL9A3-203ENST00000462700 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
COL9A3-203ENST00000462700 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
COL9A3-203ENST00000462700 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
COL9A3-203ENST00000462700 KTN1-AS1Q86SY8 53 aa4.86□□□□□ -1.63
COL9A3-203ENST00000462700 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
COL9A3-203ENST00000462700 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
COL9A3-203ENST00000462700 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
COL9A3-203ENST00000462700 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
COL9A3-203ENST00000462700 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
COL9A3-203ENST00000462700 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
COL9A3-203ENST00000462700 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
COL9A3-203ENST00000462700 KRTAP4-4Q9BYR3 166 aa4.29□□□□□ -1.72
COL9A3-203ENST00000462700 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
COL9A3-203ENST00000462700 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
COL9A3-203ENST00000462700 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
COL9A3-203ENST00000462700 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
COL9A3-203ENST00000462700 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
COL9A3-203ENST00000462700 PRM1P04553 51 aa3.21□□□□□ -1.9
COL9A3-203ENST00000462700 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
COL9A3-203ENST00000462700 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
COL9A3-203ENST00000462700 INE1O15225 51 aa2.94□□□□□ -1.94
COL9A3-203ENST00000462700 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
COL9A3-203ENST00000462700 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms