RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
PBRM1-219ENST00000462207 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
PBRM1-219ENST00000462207 TNP1P09430 55 aa5.28□□□□□ -1.56
PBRM1-219ENST00000462207 KMT2DO14686 5537 aa5.21□□□□□ -1.57
PBRM1-219ENST00000462207 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
PBRM1-219ENST00000462207 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
PBRM1-219ENST00000462207 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.59
PBRM1-219ENST00000462207 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
PBRM1-219ENST00000462207 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.6
PBRM1-219ENST00000462207 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
PBRM1-219ENST00000462207 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
PBRM1-219ENST00000462207 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
PBRM1-219ENST00000462207 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
PBRM1-219ENST00000462207 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
PBRM1-219ENST00000462207 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
PBRM1-219ENST00000462207 MT1EP04732 61 aa4.97□□□□□ -1.61
PBRM1-219ENST00000462207 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
PBRM1-219ENST00000462207 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.63
PBRM1-219ENST00000462207 SPRR2EP22531 72 aa4.87□□□□□ -1.63
PBRM1-219ENST00000462207 SPRR2BP35325 72 aa4.87□□□□□ -1.63
PBRM1-219ENST00000462207 SPRR2AP35326 72 aa4.87□□□□□ -1.63
PBRM1-219ENST00000462207 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
PBRM1-219ENST00000462207 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
PBRM1-219ENST00000462207 MT1LQ93083 61 aa4.83□□□□□ -1.64
PBRM1-219ENST00000462207 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
PBRM1-219ENST00000462207 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
PBRM1-219ENST00000462207 NEBP20929 6669 aa4.75□□□□□ -1.65
PBRM1-219ENST00000462207 MT1GP13640 62 aa4.72□□□□□ -1.65
PBRM1-219ENST00000462207 INE1O15225 51 aa4.71□□□□□ -1.66
PBRM1-219ENST00000462207 MT1MQ8N339 61 aa4.7□□□□□ -1.66
PBRM1-219ENST00000462207 SPRR2DP22532 72 aa4.69□□□□□ -1.66
PBRM1-219ENST00000462207 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
PBRM1-219ENST00000462207 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
PBRM1-219ENST00000462207 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
PBRM1-219ENST00000462207 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
PBRM1-219ENST00000462207 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
PBRM1-219ENST00000462207 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
PBRM1-219ENST00000462207 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
PBRM1-219ENST00000462207 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
PBRM1-219ENST00000462207 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
PBRM1-219ENST00000462207 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
PBRM1-219ENST00000462207 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
PBRM1-219ENST00000462207 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
PBRM1-219ENST00000462207 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
PBRM1-219ENST00000462207 MT4P47944 62 aa4.1□□□□□ -1.75
PBRM1-219ENST00000462207 MT1AP04731 61 aa4.09□□□□□ -1.75
PBRM1-219ENST00000462207 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
PBRM1-219ENST00000462207 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
PBRM1-219ENST00000462207 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
PBRM1-219ENST00000462207 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
PBRM1-219ENST00000462207 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
PBRM1-219ENST00000462207 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
PBRM1-219ENST00000462207 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
PBRM1-219ENST00000462207 MT3P25713 68 aa3.7□□□□□ -1.82
PBRM1-219ENST00000462207 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
PBRM1-219ENST00000462207 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PBRM1-219ENST00000462207 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
PBRM1-219ENST00000462207 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
PBRM1-219ENST00000462207 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
PBRM1-219ENST00000462207 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
PBRM1-219ENST00000462207 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.86
PBRM1-219ENST00000462207 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
PBRM1-219ENST00000462207 KRTAP5-8O75690 187 aa3.34□□□□□ -1.88
PBRM1-219ENST00000462207 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
PBRM1-219ENST00000462207 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
PBRM1-219ENST00000462207 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PBRM1-219ENST00000462207 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
PBRM1-219ENST00000462207 PRM1P04553 51 aa3.22□□□□□ -1.89
PBRM1-219ENST00000462207 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PBRM1-219ENST00000462207 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
PBRM1-219ENST00000462207 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
PBRM1-219ENST00000462207 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
PBRM1-219ENST00000462207 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
PBRM1-219ENST00000462207 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
PBRM1-219ENST00000462207 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PBRM1-219ENST00000462207 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
PBRM1-219ENST00000462207 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
PBRM1-219ENST00000462207 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms