RNA–Protein interactions for RNA: ENST00000461945.1

CARMIL1-202, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 1 (best) BASIC

Gene CARMIL1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-202ENST00000461945 V9GYY9 64 aa8.92□□□□□ -0.98
CARMIL1-202ENST00000461945 C10orf95Q9H7T3 257 aa8.9□□□□□ -0.98
CARMIL1-202ENST00000461945 KRTAP19-7Q3SYF9 63 aa8.89□□□□□ -0.99
CARMIL1-202ENST00000461945 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
CARMIL1-202ENST00000461945 PSPHP1O15172 72 aa8.85□□□□□ -0.99
CARMIL1-202ENST00000461945 Q1T7F1 81 aa8.85□□□□□ -0.99
CARMIL1-202ENST00000461945 TNP1P09430 55 aa8.84□□□□□ -0.99
CARMIL1-202ENST00000461945 MT1EP04732 61 aa8.8□□□□□ -1
CARMIL1-202ENST00000461945 PCP4P48539 62 aa8.78□□□□□ -1
CARMIL1-202ENST00000461945 KRTAP19-5Q3LI72 72 aa8.76□□□□□ -1.01
CARMIL1-202ENST00000461945 KRTAP2-2Q9BYT5 123 aa8.71□□□□□ -1.02
CARMIL1-202ENST00000461945 KRTAP2-1Q9BYU5 128 aa8.71□□□□□ -1.02
CARMIL1-202ENST00000461945 LCE3AQ5TA76 89 aa8.69□□□□□ -1.02
CARMIL1-202ENST00000461945 KRTAP19-3Q7Z4W3 81 aa8.68□□□□□ -1.02
CARMIL1-202ENST00000461945 K7ERS5 55 aa8.65□□□□□ -1.02
CARMIL1-202ENST00000461945 RPS28P62857 69 aaKnown RBP8.62□□□□□ -1.03
CARMIL1-202ENST00000461945 A6NED7 52 aa8.57□□□□□ -1.04
CARMIL1-202ENST00000461945 MT1GP13640 62 aa8.5□□□□□ -1.05
CARMIL1-202ENST00000461945 KRTAP25-1Q3LHN0 102 aa8.46□□□□□ -1.06
CARMIL1-202ENST00000461945 MT1LQ93083 61 aa8.46□□□□□ -1.06
CARMIL1-202ENST00000461945 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
CARMIL1-202ENST00000461945 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
CARMIL1-202ENST00000461945 MT1MQ8N339 61 aa8.36□□□□□ -1.07
CARMIL1-202ENST00000461945 DSTQ03001 7570 aaKnown RBP8.35□□□□□ -1.07
CARMIL1-202ENST00000461945 CDC42SE1Q9NRR8 79 aa8.22□□□□□ -1.09
CARMIL1-202ENST00000461945 KRTAP4-3Q9BYR4 195 aa8.17□□□□□ -1.1
CARMIL1-202ENST00000461945 ROMO1P60602 79 aa8.11□□□□□ -1.11
CARMIL1-202ENST00000461945 MT4P47944 62 aa7.8□□□□□ -1.16
CARMIL1-202ENST00000461945 KRTAP5-4Q6L8H1 288 aa7.79□□□□□ -1.16
CARMIL1-202ENST00000461945 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
CARMIL1-202ENST00000461945 HMCN1Q96RW7 5635 aa7.68□□□□□ -1.18
CARMIL1-202ENST00000461945 BRK1Q8WUW1 75 aa7.64□□□□□ -1.19
CARMIL1-202ENST00000461945 KRTAP5-5Q701N2 237 aaPredicted RBP7.62□□□□□ -1.19
CARMIL1-202ENST00000461945 KRTAP5-11Q6L8G4 156 aa7.56□□□□□ -1.2
CARMIL1-202ENST00000461945 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.56□□□□□ -1.2
CARMIL1-202ENST00000461945 GPR98Q8WXG9 6306 aa7.52□□□□□ -1.21
CARMIL1-202ENST00000461945 KRTAP12-4P60329 112 aa7.38□□□□□ -1.23
CARMIL1-202ENST00000461945 KRTAP20-2Q3LI61 65 aa7.35□□□□□ -1.23
CARMIL1-202ENST00000461945 SYNE1Q8NF91 8797 aaKnown RBP7.34□□□□□ -1.23
CARMIL1-202ENST00000461945 AHNAK2Q8IVF2 5795 aa7.34□□□□□ -1.23
CARMIL1-202ENST00000461945 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
CARMIL1-202ENST00000461945 LCE1EQ5T753 118 aa7.29□□□□□ -1.24
CARMIL1-202ENST00000461945 KRTAP9-6A8MVA2 160 aa7.26□□□□□ -1.25
CARMIL1-202ENST00000461945 MT1AP04731 61 aa7.2□□□□□ -1.26
CARMIL1-202ENST00000461945 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
CARMIL1-202ENST00000461945 KRTAP6-1Q3LI64 71 aa7.15□□□□□ -1.26
CARMIL1-202ENST00000461945 KRTAP5-10Q6L8G5 202 aa7.12□□□□□ -1.27
CARMIL1-202ENST00000461945 MT3P25713 68 aa7.06□□□□□ -1.28
CARMIL1-202ENST00000461945 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
CARMIL1-202ENST00000461945 KRTAP5-2Q701N4 177 aa6.88□□□□□ -1.31
CARMIL1-202ENST00000461945 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
CARMIL1-202ENST00000461945 KRTAP5-7Q6L8G8 165 aa6.8□□□□□ -1.32
CARMIL1-202ENST00000461945 KRTAP6-2Q3LI66 62 aa6.77□□□□□ -1.33
CARMIL1-202ENST00000461945 KRTAP5-1Q6L8H4 278 aa6.58□□□□□ -1.36
CARMIL1-202ENST00000461945 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
CARMIL1-202ENST00000461945 KRTAP5-8O75690 187 aa6.41□□□□□ -1.38
CARMIL1-202ENST00000461945 OBSCNQ5VST9 7968 aa6.35□□□□□ -1.39
CARMIL1-202ENST00000461945 LCE1FQ5T754 118 aa6.32□□□□□ -1.4
CARMIL1-202ENST00000461945 KRTAP4-4Q9BYR3 166 aa6.3□□□□□ -1.4
CARMIL1-202ENST00000461945 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
CARMIL1-202ENST00000461945 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
CARMIL1-202ENST00000461945 MUC5ACP98088 5654 aa6□□□□□ -1.45
CARMIL1-202ENST00000461945 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
CARMIL1-202ENST00000461945 AHNAKQ09666 5890 aaKnown RBP5.95□□□□□ -1.46
CARMIL1-202ENST00000461945 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
CARMIL1-202ENST00000461945 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
CARMIL1-202ENST00000461945 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
CARMIL1-202ENST00000461945 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
CARMIL1-202ENST00000461945 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
CARMIL1-202ENST00000461945 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
CARMIL1-202ENST00000461945 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
CARMIL1-202ENST00000461945 PHGR1C9JFL3 82 aa4.29□□□□□ -1.72
CARMIL1-202ENST00000461945 PRM1P04553 51 aa4.17□□□□□ -1.74
CARMIL1-202ENST00000461945 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
CARMIL1-202ENST00000461945 INE1O15225 51 aa3.91□□□□□ -1.78
CARMIL1-202ENST00000461945 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
CARMIL1-202ENST00000461945 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 47.5 ms