RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
SSB-206ENST00000461708 A0A1B0GU69 56 aa6.2□□□□□ -1.42
SSB-206ENST00000461708 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
SSB-206ENST00000461708 TNP1P09430 55 aa6.19□□□□□ -1.42
SSB-206ENST00000461708 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
SSB-206ENST00000461708 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
SSB-206ENST00000461708 A8MU10 97 aa6.15□□□□□ -1.42
SSB-206ENST00000461708 KRTAP5-10Q6L8G5 202 aa6.1□□□□□ -1.43
SSB-206ENST00000461708 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
SSB-206ENST00000461708 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
SSB-206ENST00000461708 KRTAP12-3P60328 96 aa6□□□□□ -1.45
SSB-206ENST00000461708 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
SSB-206ENST00000461708 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
SSB-206ENST00000461708 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
SSB-206ENST00000461708 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
SSB-206ENST00000461708 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
SSB-206ENST00000461708 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
SSB-206ENST00000461708 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
SSB-206ENST00000461708 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
SSB-206ENST00000461708 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
SSB-206ENST00000461708 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
SSB-206ENST00000461708 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
SSB-206ENST00000461708 UQCR11O14957 56 aa5.76□□□□□ -1.49
SSB-206ENST00000461708 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
SSB-206ENST00000461708 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
SSB-206ENST00000461708 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
SSB-206ENST00000461708 H3BS24 57 aa5.61□□□□□ -1.51
SSB-206ENST00000461708 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SSB-206ENST00000461708 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
SSB-206ENST00000461708 K7ERS5 55 aa5.56□□□□□ -1.52
SSB-206ENST00000461708 TMEM258P61165 79 aa5.56□□□□□ -1.52
SSB-206ENST00000461708 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SSB-206ENST00000461708 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
SSB-206ENST00000461708 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
SSB-206ENST00000461708 MT1AP04731 61 aa5.4□□□□□ -1.54
SSB-206ENST00000461708 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SSB-206ENST00000461708 V9GYY9 64 aa5.35□□□□□ -1.55
SSB-206ENST00000461708 PSPHP1O15172 72 aa5.3□□□□□ -1.56
SSB-206ENST00000461708 Q1T7F1 81 aa5.29□□□□□ -1.56
SSB-206ENST00000461708 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
SSB-206ENST00000461708 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
SSB-206ENST00000461708 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
SSB-206ENST00000461708 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
SSB-206ENST00000461708 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
SSB-206ENST00000461708 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
SSB-206ENST00000461708 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
SSB-206ENST00000461708 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
SSB-206ENST00000461708 A6NED7 52 aa5.13□□□□□ -1.59
SSB-206ENST00000461708 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
SSB-206ENST00000461708 ROMO1P60602 79 aa5.11□□□□□ -1.59
SSB-206ENST00000461708 MT3P25713 68 aa4.96□□□□□ -1.62
SSB-206ENST00000461708 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
SSB-206ENST00000461708 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
SSB-206ENST00000461708 PCP4P48539 62 aa4.32□□□□□ -1.72
SSB-206ENST00000461708 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SSB-206ENST00000461708 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SSB-206ENST00000461708 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
SSB-206ENST00000461708 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SSB-206ENST00000461708 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
SSB-206ENST00000461708 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
SSB-206ENST00000461708 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SSB-206ENST00000461708 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
SSB-206ENST00000461708 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
SSB-206ENST00000461708 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SSB-206ENST00000461708 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SSB-206ENST00000461708 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
SSB-206ENST00000461708 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
SSB-206ENST00000461708 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
SSB-206ENST00000461708 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
SSB-206ENST00000461708 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
SSB-206ENST00000461708 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
SSB-206ENST00000461708 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
SSB-206ENST00000461708 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
SSB-206ENST00000461708 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
SSB-206ENST00000461708 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SSB-206ENST00000461708 PRM1P04553 51 aa2.57□□□□□ -2
SSB-206ENST00000461708 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
SSB-206ENST00000461708 INE1O15225 51 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms