RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
TRAPPC12-213ENST00000461577 SPRR2DP22532 72 aa4.01□□□□□ -1.77
TRAPPC12-213ENST00000461577 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
TRAPPC12-213ENST00000461577 MIR22HGQ0VDD5 57 aa3.99□□□□□ -1.77
TRAPPC12-213ENST00000461577 TNP1P09430 55 aa3.98□□□□□ -1.77
TRAPPC12-213ENST00000461577 PSPHP1O15172 72 aa3.97□□□□□ -1.77
TRAPPC12-213ENST00000461577 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
TRAPPC12-213ENST00000461577 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
TRAPPC12-213ENST00000461577 MT1EP04732 61 aa3.93□□□□□ -1.78
TRAPPC12-213ENST00000461577 K7ERS5 55 aa3.92□□□□□ -1.78
TRAPPC12-213ENST00000461577 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
TRAPPC12-213ENST00000461577 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
TRAPPC12-213ENST00000461577 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
TRAPPC12-213ENST00000461577 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
TRAPPC12-213ENST00000461577 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
TRAPPC12-213ENST00000461577 A6NED7 52 aa3.86□□□□□ -1.79
TRAPPC12-213ENST00000461577 MT1GP13640 62 aa3.8□□□□□ -1.8
TRAPPC12-213ENST00000461577 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
TRAPPC12-213ENST00000461577 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
TRAPPC12-213ENST00000461577 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
TRAPPC12-213ENST00000461577 PP632Q6XCG6 107 aa3.79□□□□□ -1.8
TRAPPC12-213ENST00000461577 MT1LQ93083 61 aa3.77□□□□□ -1.81
TRAPPC12-213ENST00000461577 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
TRAPPC12-213ENST00000461577 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
TRAPPC12-213ENST00000461577 MT1MQ8N339 61 aa3.73□□□□□ -1.81
TRAPPC12-213ENST00000461577 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
TRAPPC12-213ENST00000461577 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
TRAPPC12-213ENST00000461577 ROMO1P60602 79 aa3.64□□□□□ -1.83
TRAPPC12-213ENST00000461577 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
TRAPPC12-213ENST00000461577 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
TRAPPC12-213ENST00000461577 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
TRAPPC12-213ENST00000461577 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
TRAPPC12-213ENST00000461577 MT4P47944 62 aa3.5□□□□□ -1.85
TRAPPC12-213ENST00000461577 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
TRAPPC12-213ENST00000461577 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
TRAPPC12-213ENST00000461577 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
TRAPPC12-213ENST00000461577 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC12-213ENST00000461577 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
TRAPPC12-213ENST00000461577 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
TRAPPC12-213ENST00000461577 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
TRAPPC12-213ENST00000461577 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
TRAPPC12-213ENST00000461577 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
TRAPPC12-213ENST00000461577 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
TRAPPC12-213ENST00000461577 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
TRAPPC12-213ENST00000461577 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TRAPPC12-213ENST00000461577 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
TRAPPC12-213ENST00000461577 MT1AP04731 61 aa3.22□□□□□ -1.89
TRAPPC12-213ENST00000461577 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TRAPPC12-213ENST00000461577 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
TRAPPC12-213ENST00000461577 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
TRAPPC12-213ENST00000461577 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
TRAPPC12-213ENST00000461577 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
TRAPPC12-213ENST00000461577 MT3P25713 68 aa2.95□□□□□ -1.94
TRAPPC12-213ENST00000461577 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
TRAPPC12-213ENST00000461577 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
TRAPPC12-213ENST00000461577 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC12-213ENST00000461577 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TRAPPC12-213ENST00000461577 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
TRAPPC12-213ENST00000461577 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
TRAPPC12-213ENST00000461577 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TRAPPC12-213ENST00000461577 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
TRAPPC12-213ENST00000461577 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
TRAPPC12-213ENST00000461577 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
TRAPPC12-213ENST00000461577 NDUFAF8A1L188 74 aa2.53□□□□□ -2
TRAPPC12-213ENST00000461577 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
TRAPPC12-213ENST00000461577 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
TRAPPC12-213ENST00000461577 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
TRAPPC12-213ENST00000461577 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TRAPPC12-213ENST00000461577 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
TRAPPC12-213ENST00000461577 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
TRAPPC12-213ENST00000461577 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
TRAPPC12-213ENST00000461577 INE1O15225 51 aa2.13□□□□□ -2.07
TRAPPC12-213ENST00000461577 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
TRAPPC12-213ENST00000461577 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TRAPPC12-213ENST00000461577 PRM1P04553 51 aa1.87□□□□□ -2.11
TRAPPC12-213ENST00000461577 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
TRAPPC12-213ENST00000461577 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
TRAPPC12-213ENST00000461577 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 57.3 ms