RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
GPN1-206ENST00000461249 K7ERS5 55 aa3.23□□□□□ -1.89
GPN1-206ENST00000461249 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
GPN1-206ENST00000461249 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
GPN1-206ENST00000461249 A6NED7 52 aa3.2□□□□□ -1.9
GPN1-206ENST00000461249 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
GPN1-206ENST00000461249 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
GPN1-206ENST00000461249 KMT2DO14686 5537 aa3.15□□□□□ -1.9
GPN1-206ENST00000461249 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
GPN1-206ENST00000461249 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
GPN1-206ENST00000461249 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
GPN1-206ENST00000461249 TNP1P09430 55 aa3.1□□□□□ -1.91
GPN1-206ENST00000461249 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
GPN1-206ENST00000461249 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
GPN1-206ENST00000461249 NEBP20929 6669 aa3.08□□□□□ -1.92
GPN1-206ENST00000461249 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
GPN1-206ENST00000461249 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
GPN1-206ENST00000461249 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
GPN1-206ENST00000461249 SPRR2EP22531 72 aa3.02□□□□□ -1.93
GPN1-206ENST00000461249 SPRR2BP35325 72 aa3.02□□□□□ -1.93
GPN1-206ENST00000461249 SPRR2AP35326 72 aa3.02□□□□□ -1.93
GPN1-206ENST00000461249 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
GPN1-206ENST00000461249 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
GPN1-206ENST00000461249 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
GPN1-206ENST00000461249 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
GPN1-206ENST00000461249 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
GPN1-206ENST00000461249 MT1EP04732 61 aa2.98□□□□□ -1.93
GPN1-206ENST00000461249 ROMO1P60602 79 aa2.98□□□□□ -1.93
GPN1-206ENST00000461249 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
GPN1-206ENST00000461249 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
GPN1-206ENST00000461249 SPRR2DP22532 72 aa2.92□□□□□ -1.94
GPN1-206ENST00000461249 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
GPN1-206ENST00000461249 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
GPN1-206ENST00000461249 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
GPN1-206ENST00000461249 MT1LQ93083 61 aa2.88□□□□□ -1.95
GPN1-206ENST00000461249 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
GPN1-206ENST00000461249 MT1GP13640 62 aa2.87□□□□□ -1.95
GPN1-206ENST00000461249 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
GPN1-206ENST00000461249 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
GPN1-206ENST00000461249 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
GPN1-206ENST00000461249 MT1MQ8N339 61 aa2.82□□□□□ -1.96
GPN1-206ENST00000461249 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
GPN1-206ENST00000461249 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
GPN1-206ENST00000461249 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
GPN1-206ENST00000461249 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
GPN1-206ENST00000461249 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
GPN1-206ENST00000461249 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
GPN1-206ENST00000461249 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
GPN1-206ENST00000461249 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
GPN1-206ENST00000461249 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
GPN1-206ENST00000461249 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
GPN1-206ENST00000461249 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
GPN1-206ENST00000461249 MT4P47944 62 aa2.54□□□□□ -2
GPN1-206ENST00000461249 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
GPN1-206ENST00000461249 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
GPN1-206ENST00000461249 MT1AP04731 61 aa2.45□□□□□ -2.02
GPN1-206ENST00000461249 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
GPN1-206ENST00000461249 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
GPN1-206ENST00000461249 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
GPN1-206ENST00000461249 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
GPN1-206ENST00000461249 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
GPN1-206ENST00000461249 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
GPN1-206ENST00000461249 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
GPN1-206ENST00000461249 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
GPN1-206ENST00000461249 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
GPN1-206ENST00000461249 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
GPN1-206ENST00000461249 INE1O15225 51 aa2.09□□□□□ -2.07
GPN1-206ENST00000461249 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
GPN1-206ENST00000461249 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
GPN1-206ENST00000461249 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
GPN1-206ENST00000461249 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
GPN1-206ENST00000461249 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
GPN1-206ENST00000461249 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
GPN1-206ENST00000461249 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
GPN1-206ENST00000461249 PRM1P04553 51 aa1.54□□□□□ -2.16
GPN1-206ENST00000461249 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
GPN1-206ENST00000461249 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
GPN1-206ENST00000461249 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 136 ms