RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
COL5A3-202ENST00000461214 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
COL5A3-202ENST00000461214 ROMO1P60602 79 aa5.54□□□□□ -1.52
COL5A3-202ENST00000461214 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
COL5A3-202ENST00000461214 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
COL5A3-202ENST00000461214 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
COL5A3-202ENST00000461214 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
COL5A3-202ENST00000461214 H3BS24 57 aa5.42□□□□□ -1.54
COL5A3-202ENST00000461214 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
COL5A3-202ENST00000461214 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
COL5A3-202ENST00000461214 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
COL5A3-202ENST00000461214 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
COL5A3-202ENST00000461214 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
COL5A3-202ENST00000461214 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
COL5A3-202ENST00000461214 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
COL5A3-202ENST00000461214 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
COL5A3-202ENST00000461214 MT1EP04732 61 aa5.31□□□□□ -1.56
COL5A3-202ENST00000461214 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
COL5A3-202ENST00000461214 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
COL5A3-202ENST00000461214 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
COL5A3-202ENST00000461214 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
COL5A3-202ENST00000461214 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
COL5A3-202ENST00000461214 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
COL5A3-202ENST00000461214 MT1LQ93083 61 aa5.15□□□□□ -1.59
COL5A3-202ENST00000461214 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
COL5A3-202ENST00000461214 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
COL5A3-202ENST00000461214 MT4P47944 62 aa5.12□□□□□ -1.59
COL5A3-202ENST00000461214 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
COL5A3-202ENST00000461214 MT1GP13640 62 aa5.11□□□□□ -1.59
COL5A3-202ENST00000461214 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
COL5A3-202ENST00000461214 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
COL5A3-202ENST00000461214 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
COL5A3-202ENST00000461214 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
COL5A3-202ENST00000461214 MT1MQ8N339 61 aa5.02□□□□□ -1.61
COL5A3-202ENST00000461214 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
COL5A3-202ENST00000461214 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
COL5A3-202ENST00000461214 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
COL5A3-202ENST00000461214 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
COL5A3-202ENST00000461214 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
COL5A3-202ENST00000461214 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
COL5A3-202ENST00000461214 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
COL5A3-202ENST00000461214 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
COL5A3-202ENST00000461214 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
COL5A3-202ENST00000461214 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
COL5A3-202ENST00000461214 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
COL5A3-202ENST00000461214 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
COL5A3-202ENST00000461214 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
COL5A3-202ENST00000461214 MT1AP04731 61 aa4.41□□□□□ -1.7
COL5A3-202ENST00000461214 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
COL5A3-202ENST00000461214 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
COL5A3-202ENST00000461214 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
COL5A3-202ENST00000461214 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
COL5A3-202ENST00000461214 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
COL5A3-202ENST00000461214 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
COL5A3-202ENST00000461214 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
COL5A3-202ENST00000461214 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
COL5A3-202ENST00000461214 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
COL5A3-202ENST00000461214 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
COL5A3-202ENST00000461214 MT3P25713 68 aa4□□□□□ -1.77
COL5A3-202ENST00000461214 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
COL5A3-202ENST00000461214 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
COL5A3-202ENST00000461214 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
COL5A3-202ENST00000461214 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
COL5A3-202ENST00000461214 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
COL5A3-202ENST00000461214 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
COL5A3-202ENST00000461214 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
COL5A3-202ENST00000461214 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
COL5A3-202ENST00000461214 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
COL5A3-202ENST00000461214 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
COL5A3-202ENST00000461214 INE1O15225 51 aa3.19□□□□□ -1.9
COL5A3-202ENST00000461214 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
COL5A3-202ENST00000461214 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
COL5A3-202ENST00000461214 PRM1P04553 51 aa2.84□□□□□ -1.95
COL5A3-202ENST00000461214 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
COL5A3-202ENST00000461214 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
COL5A3-202ENST00000461214 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
COL5A3-202ENST00000461214 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
COL5A3-202ENST00000461214 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 34 ms