RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 H7BZZ5 65 aa3.54□□□□□ -1.84
CD40-203ENST00000461171 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
CD40-203ENST00000461171 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
CD40-203ENST00000461171 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
CD40-203ENST00000461171 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
CD40-203ENST00000461171 MT1GP13640 62 aa3.49□□□□□ -1.85
CD40-203ENST00000461171 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
CD40-203ENST00000461171 MT1MQ8N339 61 aa3.45□□□□□ -1.86
CD40-203ENST00000461171 MT1LQ93083 61 aa3.45□□□□□ -1.86
CD40-203ENST00000461171 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
CD40-203ENST00000461171 A0A1B0GU69 56 aa3.44□□□□□ -1.86
CD40-203ENST00000461171 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
CD40-203ENST00000461171 A8MU10 97 aa3.43□□□□□ -1.86
CD40-203ENST00000461171 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
CD40-203ENST00000461171 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
CD40-203ENST00000461171 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.87
CD40-203ENST00000461171 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CD40-203ENST00000461171 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
CD40-203ENST00000461171 TNP1P09430 55 aa3.37□□□□□ -1.87
CD40-203ENST00000461171 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
CD40-203ENST00000461171 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
CD40-203ENST00000461171 MT4P47944 62 aa3.34□□□□□ -1.87
CD40-203ENST00000461171 CCDC179H3BU77 68 aa3.32□□□□□ -1.88
CD40-203ENST00000461171 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
CD40-203ENST00000461171 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
CD40-203ENST00000461171 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
CD40-203ENST00000461171 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
CD40-203ENST00000461171 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
CD40-203ENST00000461171 UQCR11O14957 56 aa3.2□□□□□ -1.9
CD40-203ENST00000461171 TMEM258P61165 79 aa3.2□□□□□ -1.9
CD40-203ENST00000461171 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CD40-203ENST00000461171 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
CD40-203ENST00000461171 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
CD40-203ENST00000461171 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
CD40-203ENST00000461171 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
CD40-203ENST00000461171 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CD40-203ENST00000461171 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
CD40-203ENST00000461171 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
CD40-203ENST00000461171 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
CD40-203ENST00000461171 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
CD40-203ENST00000461171 K7ERS5 55 aa3.05□□□□□ -1.92
CD40-203ENST00000461171 PSPHP1O15172 72 aa3.02□□□□□ -1.93
CD40-203ENST00000461171 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CD40-203ENST00000461171 Q1T7F1 81 aa3.01□□□□□ -1.93
CD40-203ENST00000461171 V9GYY9 64 aa3.01□□□□□ -1.93
CD40-203ENST00000461171 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
CD40-203ENST00000461171 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.93
CD40-203ENST00000461171 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
CD40-203ENST00000461171 MT3P25713 68 aa2.95□□□□□ -1.94
CD40-203ENST00000461171 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
CD40-203ENST00000461171 MT1AP04731 61 aa2.93□□□□□ -1.94
CD40-203ENST00000461171 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CD40-203ENST00000461171 A6NED7 52 aa2.91□□□□□ -1.94
CD40-203ENST00000461171 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CD40-203ENST00000461171 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
CD40-203ENST00000461171 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CD40-203ENST00000461171 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
CD40-203ENST00000461171 ROMO1P60602 79 aa2.86□□□□□ -1.95
CD40-203ENST00000461171 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CD40-203ENST00000461171 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CD40-203ENST00000461171 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
CD40-203ENST00000461171 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
CD40-203ENST00000461171 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
CD40-203ENST00000461171 PRAC1Q96KF2 57 aa2.62□□□□□ -1.99
CD40-203ENST00000461171 NDUFAF8A1L188 74 aa2.58□□□□□ -2
CD40-203ENST00000461171 LCE1FQ5T754 118 aa2.54□□□□□ -2
CD40-203ENST00000461171 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CD40-203ENST00000461171 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
CD40-203ENST00000461171 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
CD40-203ENST00000461171 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
CD40-203ENST00000461171 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
CD40-203ENST00000461171 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
CD40-203ENST00000461171 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
CD40-203ENST00000461171 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CD40-203ENST00000461171 INE1O15225 51 aa1.78□□□□□ -2.12
CD40-203ENST00000461171 PRM1P04553 51 aa1.46□□□□□ -2.18
CD40-203ENST00000461171 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CD40-203ENST00000461171 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 96.8 ms