RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
SHANK1-205ENST00000461154 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
SHANK1-205ENST00000461154 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
SHANK1-205ENST00000461154 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
SHANK1-205ENST00000461154 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
SHANK1-205ENST00000461154 MT1GP13640 62 aa5.83□□□□□ -1.48
SHANK1-205ENST00000461154 ROMO1P60602 79 aa5.81□□□□□ -1.48
SHANK1-205ENST00000461154 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
SHANK1-205ENST00000461154 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
SHANK1-205ENST00000461154 MT1LQ93083 61 aa5.8□□□□□ -1.48
SHANK1-205ENST00000461154 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SHANK1-205ENST00000461154 MT1MQ8N339 61 aa5.71□□□□□ -1.5
SHANK1-205ENST00000461154 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
SHANK1-205ENST00000461154 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
SHANK1-205ENST00000461154 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
SHANK1-205ENST00000461154 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SHANK1-205ENST00000461154 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SHANK1-205ENST00000461154 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
SHANK1-205ENST00000461154 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
SHANK1-205ENST00000461154 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
SHANK1-205ENST00000461154 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
SHANK1-205ENST00000461154 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
SHANK1-205ENST00000461154 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
SHANK1-205ENST00000461154 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
SHANK1-205ENST00000461154 MT4P47944 62 aa5.34□□□□□ -1.55
SHANK1-205ENST00000461154 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
SHANK1-205ENST00000461154 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
SHANK1-205ENST00000461154 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SHANK1-205ENST00000461154 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
SHANK1-205ENST00000461154 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
SHANK1-205ENST00000461154 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SHANK1-205ENST00000461154 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
SHANK1-205ENST00000461154 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
SHANK1-205ENST00000461154 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
SHANK1-205ENST00000461154 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
SHANK1-205ENST00000461154 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
SHANK1-205ENST00000461154 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
SHANK1-205ENST00000461154 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
SHANK1-205ENST00000461154 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
SHANK1-205ENST00000461154 MT1AP04731 61 aa4.95□□□□□ -1.62
SHANK1-205ENST00000461154 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
SHANK1-205ENST00000461154 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
SHANK1-205ENST00000461154 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
SHANK1-205ENST00000461154 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
SHANK1-205ENST00000461154 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
SHANK1-205ENST00000461154 SVIPQ8NHG7 77 aa4.66□□□□□ -1.66
SHANK1-205ENST00000461154 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
SHANK1-205ENST00000461154 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
SHANK1-205ENST00000461154 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SHANK1-205ENST00000461154 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
SHANK1-205ENST00000461154 MT3P25713 68 aa4.53□□□□□ -1.68
SHANK1-205ENST00000461154 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
SHANK1-205ENST00000461154 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SHANK1-205ENST00000461154 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
SHANK1-205ENST00000461154 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SHANK1-205ENST00000461154 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
SHANK1-205ENST00000461154 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
SHANK1-205ENST00000461154 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
SHANK1-205ENST00000461154 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SHANK1-205ENST00000461154 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
SHANK1-205ENST00000461154 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
SHANK1-205ENST00000461154 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
SHANK1-205ENST00000461154 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SHANK1-205ENST00000461154 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
SHANK1-205ENST00000461154 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
SHANK1-205ENST00000461154 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
SHANK1-205ENST00000461154 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
SHANK1-205ENST00000461154 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
SHANK1-205ENST00000461154 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SHANK1-205ENST00000461154 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SHANK1-205ENST00000461154 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
SHANK1-205ENST00000461154 H3BS24 57 aa3.07□□□□□ -1.92
SHANK1-205ENST00000461154 INE1O15225 51 aa3.02□□□□□ -1.93
SHANK1-205ENST00000461154 PRM1P04553 51 aa2.98□□□□□ -1.93
SHANK1-205ENST00000461154 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
SHANK1-205ENST00000461154 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SHANK1-205ENST00000461154 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SHANK1-205ENST00000461154 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 95 ms