RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
CSDC2-202ENST00000460790 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
CSDC2-202ENST00000460790 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
CSDC2-202ENST00000460790 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
CSDC2-202ENST00000460790 MT1GP13640 62 aa3.83□□□□□ -1.8
CSDC2-202ENST00000460790 SPRR2EP22531 72 aa3.83□□□□□ -1.8
CSDC2-202ENST00000460790 SPRR2BP35325 72 aa3.83□□□□□ -1.8
CSDC2-202ENST00000460790 SPRR2AP35326 72 aa3.83□□□□□ -1.8
CSDC2-202ENST00000460790 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
CSDC2-202ENST00000460790 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
CSDC2-202ENST00000460790 MT1MQ8N339 61 aa3.77□□□□□ -1.81
CSDC2-202ENST00000460790 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
CSDC2-202ENST00000460790 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
CSDC2-202ENST00000460790 SPRR2DP22532 72 aa3.69□□□□□ -1.82
CSDC2-202ENST00000460790 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
CSDC2-202ENST00000460790 NEBP20929 6669 aa3.65□□□□□ -1.82
CSDC2-202ENST00000460790 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
CSDC2-202ENST00000460790 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
CSDC2-202ENST00000460790 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
CSDC2-202ENST00000460790 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
CSDC2-202ENST00000460790 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
CSDC2-202ENST00000460790 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
CSDC2-202ENST00000460790 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
CSDC2-202ENST00000460790 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CSDC2-202ENST00000460790 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
CSDC2-202ENST00000460790 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
CSDC2-202ENST00000460790 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
CSDC2-202ENST00000460790 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CSDC2-202ENST00000460790 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
CSDC2-202ENST00000460790 MT1AP04731 61 aa3.31□□□□□ -1.88
CSDC2-202ENST00000460790 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
CSDC2-202ENST00000460790 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CSDC2-202ENST00000460790 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CSDC2-202ENST00000460790 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CSDC2-202ENST00000460790 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
CSDC2-202ENST00000460790 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
CSDC2-202ENST00000460790 MT4P47944 62 aa3.2□□□□□ -1.9
CSDC2-202ENST00000460790 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
CSDC2-202ENST00000460790 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
CSDC2-202ENST00000460790 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
CSDC2-202ENST00000460790 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
CSDC2-202ENST00000460790 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
CSDC2-202ENST00000460790 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
CSDC2-202ENST00000460790 H3BS24 57 aa3.03□□□□□ -1.92
CSDC2-202ENST00000460790 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CSDC2-202ENST00000460790 MT3P25713 68 aa3.02□□□□□ -1.93
CSDC2-202ENST00000460790 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
CSDC2-202ENST00000460790 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
CSDC2-202ENST00000460790 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
CSDC2-202ENST00000460790 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CSDC2-202ENST00000460790 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
CSDC2-202ENST00000460790 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
CSDC2-202ENST00000460790 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
CSDC2-202ENST00000460790 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CSDC2-202ENST00000460790 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
CSDC2-202ENST00000460790 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
CSDC2-202ENST00000460790 INE1O15225 51 aa2.67□□□□□ -1.98
CSDC2-202ENST00000460790 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
CSDC2-202ENST00000460790 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CSDC2-202ENST00000460790 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
CSDC2-202ENST00000460790 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
CSDC2-202ENST00000460790 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CSDC2-202ENST00000460790 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CSDC2-202ENST00000460790 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CSDC2-202ENST00000460790 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CSDC2-202ENST00000460790 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
CSDC2-202ENST00000460790 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CSDC2-202ENST00000460790 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
CSDC2-202ENST00000460790 PRM1P04553 51 aa2.28□□□□□ -2.04
CSDC2-202ENST00000460790 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
CSDC2-202ENST00000460790 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CSDC2-202ENST00000460790 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
CSDC2-202ENST00000460790 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
CSDC2-202ENST00000460790 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
CSDC2-202ENST00000460790 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CSDC2-202ENST00000460790 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
CSDC2-202ENST00000460790 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
CSDC2-202ENST00000460790 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 76.3 ms