RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MT4P47944 62 aa5.02□□□□□ -1.61
SCAMP4-206ENST00000460767 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
SCAMP4-206ENST00000460767 Q1T7F1 81 aa4.99□□□□□ -1.61
SCAMP4-206ENST00000460767 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
SCAMP4-206ENST00000460767 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
SCAMP4-206ENST00000460767 V9GYY9 64 aa4.95□□□□□ -1.62
SCAMP4-206ENST00000460767 TNP1P09430 55 aa4.93□□□□□ -1.62
SCAMP4-206ENST00000460767 MT1GP13640 62 aa4.93□□□□□ -1.62
SCAMP4-206ENST00000460767 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
SCAMP4-206ENST00000460767 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
SCAMP4-206ENST00000460767 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
SCAMP4-206ENST00000460767 PSPHP1O15172 72 aa4.88□□□□□ -1.63
SCAMP4-206ENST00000460767 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
SCAMP4-206ENST00000460767 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
SCAMP4-206ENST00000460767 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
SCAMP4-206ENST00000460767 MT1LQ93083 61 aa4.85□□□□□ -1.63
SCAMP4-206ENST00000460767 MT1MQ8N339 61 aa4.82□□□□□ -1.64
SCAMP4-206ENST00000460767 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
SCAMP4-206ENST00000460767 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SCAMP4-206ENST00000460767 K7ERS5 55 aa4.71□□□□□ -1.66
SCAMP4-206ENST00000460767 A6NED7 52 aa4.7□□□□□ -1.66
SCAMP4-206ENST00000460767 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
SCAMP4-206ENST00000460767 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
SCAMP4-206ENST00000460767 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
SCAMP4-206ENST00000460767 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
SCAMP4-206ENST00000460767 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
SCAMP4-206ENST00000460767 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
SCAMP4-206ENST00000460767 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
SCAMP4-206ENST00000460767 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
SCAMP4-206ENST00000460767 ROMO1P60602 79 aa4.51□□□□□ -1.69
SCAMP4-206ENST00000460767 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
SCAMP4-206ENST00000460767 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
SCAMP4-206ENST00000460767 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
SCAMP4-206ENST00000460767 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SCAMP4-206ENST00000460767 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
SCAMP4-206ENST00000460767 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
SCAMP4-206ENST00000460767 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
SCAMP4-206ENST00000460767 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
SCAMP4-206ENST00000460767 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
SCAMP4-206ENST00000460767 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
SCAMP4-206ENST00000460767 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
SCAMP4-206ENST00000460767 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SCAMP4-206ENST00000460767 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
SCAMP4-206ENST00000460767 MT1AP04731 61 aa4.12□□□□□ -1.75
SCAMP4-206ENST00000460767 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SCAMP4-206ENST00000460767 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
SCAMP4-206ENST00000460767 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
SCAMP4-206ENST00000460767 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
SCAMP4-206ENST00000460767 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
SCAMP4-206ENST00000460767 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
SCAMP4-206ENST00000460767 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SCAMP4-206ENST00000460767 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
SCAMP4-206ENST00000460767 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
SCAMP4-206ENST00000460767 MT3P25713 68 aa3.73□□□□□ -1.81
SCAMP4-206ENST00000460767 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
SCAMP4-206ENST00000460767 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SCAMP4-206ENST00000460767 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
SCAMP4-206ENST00000460767 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
SCAMP4-206ENST00000460767 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SCAMP4-206ENST00000460767 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
SCAMP4-206ENST00000460767 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SCAMP4-206ENST00000460767 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
SCAMP4-206ENST00000460767 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
SCAMP4-206ENST00000460767 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SCAMP4-206ENST00000460767 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
SCAMP4-206ENST00000460767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
SCAMP4-206ENST00000460767 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SCAMP4-206ENST00000460767 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SCAMP4-206ENST00000460767 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
SCAMP4-206ENST00000460767 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SCAMP4-206ENST00000460767 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SCAMP4-206ENST00000460767 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
SCAMP4-206ENST00000460767 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
SCAMP4-206ENST00000460767 PRM1P04553 51 aa2.31□□□□□ -2.04
SCAMP4-206ENST00000460767 INE1O15225 51 aa2.3□□□□□ -2.04
SCAMP4-206ENST00000460767 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
SCAMP4-206ENST00000460767 H3BS24 57 aa2.07□□□□□ -2.08
SCAMP4-206ENST00000460767 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms