RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
ATRX-204ENST00000460639 DNAH7Q8WXX0 4024 aa1.45□□□□□ -2.18
ATRX-204ENST00000460639 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
ATRX-204ENST00000460639 STARD9Q9P2P6 4700 aa1.45□□□□□ -2.18
ATRX-204ENST00000460639 FAT1Q14517 4588 aa1.44□□□□□ -2.18
ATRX-204ENST00000460639 VPS13DQ5THJ4 4388 aa1.44□□□□□ -2.18
ATRX-204ENST00000460639 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
ATRX-204ENST00000460639 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
ATRX-204ENST00000460639 HUWE1Q7Z6Z7 4374 aaKnown RBP1.43□□□□□ -2.18
ATRX-204ENST00000460639 LRP2P98164 4655 aa1.43□□□□□ -2.18
ATRX-204ENST00000460639 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
ATRX-204ENST00000460639 KRTAP20-1Q3LI63 56 aa1.4□□□□□ -2.19
ATRX-204ENST00000460639 APOBP04114 4563 aaKnown RBP1.39□□□□□ -2.19
ATRX-204ENST00000460639 M0R2T5 61 aa1.39□□□□□ -2.19
ATRX-204ENST00000460639 PKHD1L1Q86WI1 4243 aa1.39□□□□□ -2.19
ATRX-204ENST00000460639 LRP1BQ9NZR2 4599 aa1.38□□□□□ -2.19
ATRX-204ENST00000460639 USH2AO75445 5202 aa1.38□□□□□ -2.19
ATRX-204ENST00000460639 DNAH3Q8TD57 4116 aa1.38□□□□□ -2.19
ATRX-204ENST00000460639 KMT2DO14686 5537 aa1.37□□□□□ -2.19
ATRX-204ENST00000460639 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
ATRX-204ENST00000460639 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
ATRX-204ENST00000460639 PKD1P98161 4303 aa1.35□□□□□ -2.19
ATRX-204ENST00000460639 DNAH6Q9C0G6 4158 aa1.34□□□□□ -2.2
ATRX-204ENST00000460639 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
ATRX-204ENST00000460639 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
ATRX-204ENST00000460639 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
ATRX-204ENST00000460639 KRTAP2-3P0C7H8 128 aa1.32□□□□□ -2.2
ATRX-204ENST00000460639 KRTAP2-4Q9BYR9 128 aa1.32□□□□□ -2.2
ATRX-204ENST00000460639 KRTAP2-1Q9BYU5 128 aa1.32□□□□□ -2.2
ATRX-204ENST00000460639 DNAH2Q9P225 4427 aa1.32□□□□□ -2.2
ATRX-204ENST00000460639 DNAH17Q9UFH2 4485 aa1.31□□□□□ -2.2
ATRX-204ENST00000460639 KRTAP8-1Q8IUC2 63 aa1.31□□□□□ -2.2
ATRX-204ENST00000460639 HRNRQ86YZ3 2850 aaPredicted RBP1.3□□□□□ -2.2
ATRX-204ENST00000460639 VPS13BQ7Z7G8 4022 aa1.3□□□□□ -2.2
ATRX-204ENST00000460639 DNAH8Q96JB1 4490 aa1.29□□□□□ -2.2
ATRX-204ENST00000460639 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
ATRX-204ENST00000460639 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
ATRX-204ENST00000460639 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
ATRX-204ENST00000460639 TNXBP22105 4242 aa1.21□□□□□ -2.22
ATRX-204ENST00000460639 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
ATRX-204ENST00000460639 LPAP08519 4548 aa1.18□□□□□ -2.22
ATRX-204ENST00000460639 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
ATRX-204ENST00000460639 SMR3BP02814 79 aaPredicted RBP1.16□□□□□ -2.22
ATRX-204ENST00000460639 MUC17Q685J3 4493 aa1.15□□□□□ -2.22
ATRX-204ENST00000460639 FLGP20930 4061 aaPredicted RBP1.15□□□□□ -2.23
ATRX-204ENST00000460639 PRM1P04553 51 aa1.14□□□□□ -2.23
ATRX-204ENST00000460639 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
ATRX-204ENST00000460639 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
ATRX-204ENST00000460639 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
ATRX-204ENST00000460639 MT1AP04731 61 aa1.05□□□□□ -2.24
ATRX-204ENST00000460639 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
ATRX-204ENST00000460639 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
ATRX-204ENST00000460639 SPRR2DP22532 72 aa0.97□□□□□ -2.25
ATRX-204ENST00000460639 SPRR2BP35325 72 aa0.97□□□□□ -2.25
ATRX-204ENST00000460639 SPRR2AP35326 72 aa0.96□□□□□ -2.26
ATRX-204ENST00000460639 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
ATRX-204ENST00000460639 SPRR2EP22531 72 aa0.95□□□□□ -2.26
ATRX-204ENST00000460639 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
ATRX-204ENST00000460639 MT1EP04732 61 aa0.94□□□□□ -2.26
ATRX-204ENST00000460639 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
ATRX-204ENST00000460639 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
ATRX-204ENST00000460639 MT1HP80294 61 aa0.9□□□□□ -2.27
ATRX-204ENST00000460639 MT1XP80297 61 aa0.9□□□□□ -2.27
ATRX-204ENST00000460639 MT1LQ93083 61 aa0.9□□□□□ -2.27
ATRX-204ENST00000460639 MT4P47944 62 aa0.88□□□□□ -2.27
ATRX-204ENST00000460639 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
ATRX-204ENST00000460639 KRTAP19-2Q3LHN2 52 aa0.85□□□□□ -2.27
ATRX-204ENST00000460639 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
ATRX-204ENST00000460639 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
ATRX-204ENST00000460639 MT1BP07438 61 aa0.79□□□□□ -2.28
ATRX-204ENST00000460639 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
ATRX-204ENST00000460639 MT1GP13640 62 aa0.76□□□□□ -2.29
ATRX-204ENST00000460639 MT2AP02795 61 aa0.72□□□□□ -2.29
ATRX-204ENST00000460639 MT1FP04733 61 aa0.71□□□□□ -2.3
ATRX-204ENST00000460639 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
ATRX-204ENST00000460639 MT1MQ8N339 61 aa0.69□□□□□ -2.3
ATRX-204ENST00000460639 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
ATRX-204ENST00000460639 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 118.3 ms