RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
ABCA4-202ENST00000460514 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
ABCA4-202ENST00000460514 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
ABCA4-202ENST00000460514 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
ABCA4-202ENST00000460514 MT1XP80297 61 aa3.15□□□□□ -1.91
ABCA4-202ENST00000460514 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
ABCA4-202ENST00000460514 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
ABCA4-202ENST00000460514 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
ABCA4-202ENST00000460514 TNP1P09430 55 aa3.03□□□□□ -1.92
ABCA4-202ENST00000460514 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
ABCA4-202ENST00000460514 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
ABCA4-202ENST00000460514 ROMO1P60602 79 aa2.98□□□□□ -1.93
ABCA4-202ENST00000460514 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
ABCA4-202ENST00000460514 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
ABCA4-202ENST00000460514 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
ABCA4-202ENST00000460514 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
ABCA4-202ENST00000460514 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
ABCA4-202ENST00000460514 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
ABCA4-202ENST00000460514 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
ABCA4-202ENST00000460514 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
ABCA4-202ENST00000460514 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
ABCA4-202ENST00000460514 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
ABCA4-202ENST00000460514 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
ABCA4-202ENST00000460514 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
ABCA4-202ENST00000460514 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
ABCA4-202ENST00000460514 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
ABCA4-202ENST00000460514 KMT2DO14686 5537 aa2.82□□□□□ -1.96
ABCA4-202ENST00000460514 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
ABCA4-202ENST00000460514 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
ABCA4-202ENST00000460514 MT1EP04732 61 aa2.79□□□□□ -1.96
ABCA4-202ENST00000460514 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
ABCA4-202ENST00000460514 SPRR2EP22531 72 aa2.78□□□□□ -1.96
ABCA4-202ENST00000460514 SPRR2BP35325 72 aa2.78□□□□□ -1.96
ABCA4-202ENST00000460514 SPRR2AP35326 72 aa2.78□□□□□ -1.96
ABCA4-202ENST00000460514 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
ABCA4-202ENST00000460514 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
ABCA4-202ENST00000460514 MT1GP13640 62 aa2.71□□□□□ -1.98
ABCA4-202ENST00000460514 KTN1-AS1Q86SY8 53 aa2.71□□□□□ -1.98
ABCA4-202ENST00000460514 MT1LQ93083 61 aa2.7□□□□□ -1.98
ABCA4-202ENST00000460514 SPRR2DP22532 72 aa2.69□□□□□ -1.98
ABCA4-202ENST00000460514 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
ABCA4-202ENST00000460514 NEBP20929 6669 aa2.66□□□□□ -1.98
ABCA4-202ENST00000460514 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
ABCA4-202ENST00000460514 MT1MQ8N339 61 aa2.64□□□□□ -1.99
ABCA4-202ENST00000460514 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
ABCA4-202ENST00000460514 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
ABCA4-202ENST00000460514 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
ABCA4-202ENST00000460514 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
ABCA4-202ENST00000460514 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
ABCA4-202ENST00000460514 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
ABCA4-202ENST00000460514 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.01
ABCA4-202ENST00000460514 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
ABCA4-202ENST00000460514 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
ABCA4-202ENST00000460514 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
ABCA4-202ENST00000460514 MT1AP04731 61 aa2.32□□□□□ -2.04
ABCA4-202ENST00000460514 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
ABCA4-202ENST00000460514 MT4P47944 62 aa2.31□□□□□ -2.04
ABCA4-202ENST00000460514 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
ABCA4-202ENST00000460514 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
ABCA4-202ENST00000460514 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
ABCA4-202ENST00000460514 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
ABCA4-202ENST00000460514 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
ABCA4-202ENST00000460514 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
ABCA4-202ENST00000460514 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
ABCA4-202ENST00000460514 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
ABCA4-202ENST00000460514 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
ABCA4-202ENST00000460514 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
ABCA4-202ENST00000460514 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
ABCA4-202ENST00000460514 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
ABCA4-202ENST00000460514 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
ABCA4-202ENST00000460514 INE1O15225 51 aa1.74□□□□□ -2.13
ABCA4-202ENST00000460514 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
ABCA4-202ENST00000460514 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
ABCA4-202ENST00000460514 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
ABCA4-202ENST00000460514 PRM1P04553 51 aa1.52□□□□□ -2.17
ABCA4-202ENST00000460514 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ABCA4-202ENST00000460514 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
ABCA4-202ENST00000460514 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 15.1 ms