RNA–Protein interactions for RNA: ENST00000460123.1

GRIA3-201, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2

Gene GRIA3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-201ENST00000460123 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
GRIA3-201ENST00000460123 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
GRIA3-201ENST00000460123 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
GRIA3-201ENST00000460123 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.7
GRIA3-201ENST00000460123 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
GRIA3-201ENST00000460123 KMT2DO14686 5537 aa4.3□□□□□ -1.72
GRIA3-201ENST00000460123 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
GRIA3-201ENST00000460123 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
GRIA3-201ENST00000460123 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
GRIA3-201ENST00000460123 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
GRIA3-201ENST00000460123 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
GRIA3-201ENST00000460123 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
GRIA3-201ENST00000460123 MT1EP04732 61 aa4.17□□□□□ -1.74
GRIA3-201ENST00000460123 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
GRIA3-201ENST00000460123 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
GRIA3-201ENST00000460123 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
GRIA3-201ENST00000460123 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
GRIA3-201ENST00000460123 MT1LQ93083 61 aa4.07□□□□□ -1.76
GRIA3-201ENST00000460123 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
GRIA3-201ENST00000460123 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
GRIA3-201ENST00000460123 MT1GP13640 62 aa3.99□□□□□ -1.77
GRIA3-201ENST00000460123 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
GRIA3-201ENST00000460123 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
GRIA3-201ENST00000460123 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
GRIA3-201ENST00000460123 SPRR2EP22531 72 aa3.94□□□□□ -1.78
GRIA3-201ENST00000460123 SPRR2BP35325 72 aa3.94□□□□□ -1.78
GRIA3-201ENST00000460123 SPRR2AP35326 72 aa3.94□□□□□ -1.78
GRIA3-201ENST00000460123 MT1MQ8N339 61 aa3.93□□□□□ -1.78
GRIA3-201ENST00000460123 MT3P25713 68 aa3.86□□□□□ -1.79
GRIA3-201ENST00000460123 NEBP20929 6669 aa3.83□□□□□ -1.8
GRIA3-201ENST00000460123 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
GRIA3-201ENST00000460123 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
GRIA3-201ENST00000460123 SPRR2DP22532 72 aa3.8□□□□□ -1.8
GRIA3-201ENST00000460123 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
GRIA3-201ENST00000460123 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
GRIA3-201ENST00000460123 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
GRIA3-201ENST00000460123 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
GRIA3-201ENST00000460123 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
GRIA3-201ENST00000460123 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
GRIA3-201ENST00000460123 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
GRIA3-201ENST00000460123 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
GRIA3-201ENST00000460123 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
GRIA3-201ENST00000460123 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
GRIA3-201ENST00000460123 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
GRIA3-201ENST00000460123 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
GRIA3-201ENST00000460123 MT1AP04731 61 aa3.48□□□□□ -1.85
GRIA3-201ENST00000460123 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
GRIA3-201ENST00000460123 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
GRIA3-201ENST00000460123 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
GRIA3-201ENST00000460123 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
GRIA3-201ENST00000460123 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
GRIA3-201ENST00000460123 MT4P47944 62 aa3.27□□□□□ -1.89
GRIA3-201ENST00000460123 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
GRIA3-201ENST00000460123 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
GRIA3-201ENST00000460123 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
GRIA3-201ENST00000460123 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
GRIA3-201ENST00000460123 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
GRIA3-201ENST00000460123 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
GRIA3-201ENST00000460123 INE1O15225 51 aa3.03□□□□□ -1.92
GRIA3-201ENST00000460123 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
GRIA3-201ENST00000460123 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
GRIA3-201ENST00000460123 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
GRIA3-201ENST00000460123 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
GRIA3-201ENST00000460123 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
GRIA3-201ENST00000460123 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
GRIA3-201ENST00000460123 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
GRIA3-201ENST00000460123 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
GRIA3-201ENST00000460123 MUC5ACP98088 5654 aa2.56□□□□□ -2
GRIA3-201ENST00000460123 LCE1CQ5T751 118 aa2.56□□□□□ -2
GRIA3-201ENST00000460123 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
GRIA3-201ENST00000460123 PRM1P04553 51 aa2.5□□□□□ -2.01
GRIA3-201ENST00000460123 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
GRIA3-201ENST00000460123 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
GRIA3-201ENST00000460123 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
GRIA3-201ENST00000460123 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
GRIA3-201ENST00000460123 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
GRIA3-201ENST00000460123 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
GRIA3-201ENST00000460123 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 63.1 ms