RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
CENPA-204ENST00000460030 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CENPA-204ENST00000460030 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
CENPA-204ENST00000460030 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
CENPA-204ENST00000460030 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
CENPA-204ENST00000460030 ROMO1P60602 79 aa6.74□□□□□ -1.33
CENPA-204ENST00000460030 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CENPA-204ENST00000460030 MT1GP13640 62 aa6.72□□□□□ -1.33
CENPA-204ENST00000460030 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
CENPA-204ENST00000460030 MT1LQ93083 61 aa6.7□□□□□ -1.34
CENPA-204ENST00000460030 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
CENPA-204ENST00000460030 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
CENPA-204ENST00000460030 MT1MQ8N339 61 aa6.58□□□□□ -1.36
CENPA-204ENST00000460030 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
CENPA-204ENST00000460030 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
CENPA-204ENST00000460030 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
CENPA-204ENST00000460030 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
CENPA-204ENST00000460030 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
CENPA-204ENST00000460030 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
CENPA-204ENST00000460030 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
CENPA-204ENST00000460030 MT4P47944 62 aa6.36□□□□□ -1.39
CENPA-204ENST00000460030 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
CENPA-204ENST00000460030 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
CENPA-204ENST00000460030 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
CENPA-204ENST00000460030 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
CENPA-204ENST00000460030 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
CENPA-204ENST00000460030 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
CENPA-204ENST00000460030 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
CENPA-204ENST00000460030 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
CENPA-204ENST00000460030 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
CENPA-204ENST00000460030 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CENPA-204ENST00000460030 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
CENPA-204ENST00000460030 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
CENPA-204ENST00000460030 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
CENPA-204ENST00000460030 PRAC1Q96KF2 57 aa5.84□□□□□ -1.47
CENPA-204ENST00000460030 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CENPA-204ENST00000460030 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
CENPA-204ENST00000460030 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CENPA-204ENST00000460030 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
CENPA-204ENST00000460030 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
CENPA-204ENST00000460030 MT1AP04731 61 aa5.71□□□□□ -1.5
CENPA-204ENST00000460030 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
CENPA-204ENST00000460030 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
CENPA-204ENST00000460030 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
CENPA-204ENST00000460030 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
CENPA-204ENST00000460030 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
CENPA-204ENST00000460030 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
CENPA-204ENST00000460030 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
CENPA-204ENST00000460030 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CENPA-204ENST00000460030 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
CENPA-204ENST00000460030 MT3P25713 68 aa5.22□□□□□ -1.57
CENPA-204ENST00000460030 MUC5BQ9HC84 5762 aaPredicted RBP5.11□□□□□ -1.59
CENPA-204ENST00000460030 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
CENPA-204ENST00000460030 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
CENPA-204ENST00000460030 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
CENPA-204ENST00000460030 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
CENPA-204ENST00000460030 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
CENPA-204ENST00000460030 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
CENPA-204ENST00000460030 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
CENPA-204ENST00000460030 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
CENPA-204ENST00000460030 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
CENPA-204ENST00000460030 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CENPA-204ENST00000460030 H3BS24 57 aa4.36□□□□□ -1.71
CENPA-204ENST00000460030 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
CENPA-204ENST00000460030 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
CENPA-204ENST00000460030 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
CENPA-204ENST00000460030 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CENPA-204ENST00000460030 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CENPA-204ENST00000460030 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CENPA-204ENST00000460030 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
CENPA-204ENST00000460030 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
CENPA-204ENST00000460030 INE1O15225 51 aa3.52□□□□□ -1.85
CENPA-204ENST00000460030 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
CENPA-204ENST00000460030 PRM1P04553 51 aa3.44□□□□□ -1.86
CENPA-204ENST00000460030 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CENPA-204ENST00000460030 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CENPA-204ENST00000460030 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CENPA-204ENST00000460030 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms