RNA–Protein interactions for RNA: ENST00000460007.1

SVIL-204, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-204ENST00000460007 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
SVIL-204ENST00000460007 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
SVIL-204ENST00000460007 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
SVIL-204ENST00000460007 MT1GP13640 62 aa6.77□□□□□ -1.33
SVIL-204ENST00000460007 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
SVIL-204ENST00000460007 MT1LQ93083 61 aa6.74□□□□□ -1.33
SVIL-204ENST00000460007 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
SVIL-204ENST00000460007 MT1MQ8N339 61 aa6.66□□□□□ -1.34
SVIL-204ENST00000460007 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
SVIL-204ENST00000460007 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
SVIL-204ENST00000460007 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
SVIL-204ENST00000460007 ROMO1P60602 79 aa6.52□□□□□ -1.37
SVIL-204ENST00000460007 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
SVIL-204ENST00000460007 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
SVIL-204ENST00000460007 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
SVIL-204ENST00000460007 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SVIL-204ENST00000460007 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
SVIL-204ENST00000460007 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
SVIL-204ENST00000460007 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
SVIL-204ENST00000460007 MT4P47944 62 aa6.19□□□□□ -1.42
SVIL-204ENST00000460007 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
SVIL-204ENST00000460007 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
SVIL-204ENST00000460007 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
SVIL-204ENST00000460007 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
SVIL-204ENST00000460007 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
SVIL-204ENST00000460007 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
SVIL-204ENST00000460007 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
SVIL-204ENST00000460007 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
SVIL-204ENST00000460007 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
SVIL-204ENST00000460007 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
SVIL-204ENST00000460007 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
SVIL-204ENST00000460007 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
SVIL-204ENST00000460007 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
SVIL-204ENST00000460007 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
SVIL-204ENST00000460007 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
SVIL-204ENST00000460007 MT1AP04731 61 aa5.74□□□□□ -1.49
SVIL-204ENST00000460007 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
SVIL-204ENST00000460007 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
SVIL-204ENST00000460007 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
SVIL-204ENST00000460007 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
SVIL-204ENST00000460007 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
SVIL-204ENST00000460007 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
SVIL-204ENST00000460007 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
SVIL-204ENST00000460007 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
SVIL-204ENST00000460007 KRTAP5-7Q6L8G8 165 aa5.39□□□□□ -1.55
SVIL-204ENST00000460007 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
SVIL-204ENST00000460007 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
SVIL-204ENST00000460007 MT3P25713 68 aa5.25□□□□□ -1.57
SVIL-204ENST00000460007 H3BS24 57 aa5.08□□□□□ -1.6
SVIL-204ENST00000460007 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
SVIL-204ENST00000460007 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
SVIL-204ENST00000460007 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
SVIL-204ENST00000460007 KRTAP5-1Q6L8H4 278 aa4.85□□□□□ -1.63
SVIL-204ENST00000460007 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
SVIL-204ENST00000460007 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
SVIL-204ENST00000460007 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
SVIL-204ENST00000460007 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
SVIL-204ENST00000460007 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
SVIL-204ENST00000460007 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
SVIL-204ENST00000460007 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
SVIL-204ENST00000460007 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
SVIL-204ENST00000460007 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
SVIL-204ENST00000460007 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
SVIL-204ENST00000460007 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
SVIL-204ENST00000460007 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
SVIL-204ENST00000460007 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
SVIL-204ENST00000460007 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
SVIL-204ENST00000460007 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
SVIL-204ENST00000460007 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
SVIL-204ENST00000460007 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SVIL-204ENST00000460007 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
SVIL-204ENST00000460007 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
SVIL-204ENST00000460007 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
SVIL-204ENST00000460007 PRM1P04553 51 aa3.34□□□□□ -1.87
SVIL-204ENST00000460007 INE1O15225 51 aa3.19□□□□□ -1.9
SVIL-204ENST00000460007 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
SVIL-204ENST00000460007 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SVIL-204ENST00000460007 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 126.8 ms