RNA–Protein interactions for RNA: ENST00000459810.1

SUN1-223, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-223	ENST00000459810	SERP1	Q9Y6X1	66 aa		6.54	□□□□□ -1.36
SUN1-223	ENST00000459810	KRTAP4-12	Q9BQ66	201 aa		6.52	□□□□□ -1.37
SUN1-223	ENST00000459810	SNURF	Q9Y675	71 aa		6.52	□□□□□ -1.37
SUN1-223	ENST00000459810	KRTAP4-7	Q9BYR0	210 aa		6.51	□□□□□ -1.37
SUN1-223	ENST00000459810	KRTAP19-4	Q3LI73	84 aa		6.5	□□□□□ -1.37
SUN1-223	ENST00000459810		A0A1B0GU33	70 aa		6.49	□□□□□ -1.37
SUN1-223	ENST00000459810	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.49	□□□□□ -1.37
SUN1-223	ENST00000459810	KRTAP12-4	P60329	112 aa		6.47	□□□□□ -1.37
SUN1-223	ENST00000459810	TNP1	P09430	55 aa		6.45	□□□□□ -1.38
SUN1-223	ENST00000459810		K7ERU9	68 aa		6.44	□□□□□ -1.38
SUN1-223	ENST00000459810	COA5	Q86WW8	74 aa		6.38	□□□□□ -1.39
SUN1-223	ENST00000459810	KRTAP9-9	Q9BYP9	154 aa		6.38	□□□□□ -1.39
SUN1-223	ENST00000459810	KRTAP9-4	Q9BYQ2	154 aa		6.38	□□□□□ -1.39
SUN1-223	ENST00000459810	KRTAP12-3	P60328	96 aa		6.33	□□□□□ -1.4
SUN1-223	ENST00000459810	SMIM26	A0A096LP01	95 aa		6.31	□□□□□ -1.4
SUN1-223	ENST00000459810	SYNE1	Q8NF91	8797 aa	Known RBP	6.31	□□□□□ -1.4
SUN1-223	ENST00000459810		A0A0A0MQY5	61 aa		6.28	□□□□□ -1.4
SUN1-223	ENST00000459810	KRTAP4-11	Q9BYQ6	195 aa		6.22	□□□□□ -1.41
SUN1-223	ENST00000459810		A8MU10	97 aa		6.21	□□□□□ -1.42
SUN1-223	ENST00000459810	SERP2	Q8N6R1	65 aa		6.17	□□□□□ -1.42
SUN1-223	ENST00000459810		A0A1B0GU69	56 aa		6.09	□□□□□ -1.43
SUN1-223	ENST00000459810	KRTAP5-2	Q701N4	177 aa		6.05	□□□□□ -1.44
SUN1-223	ENST00000459810	KRTAP5-8	O75690	187 aa		6.02	□□□□□ -1.45
SUN1-223	ENST00000459810	MUC5AC	P98088	5654 aa		6.01	□□□□□ -1.45
SUN1-223	ENST00000459810	AHNAK	Q09666	5890 aa	Known RBP	5.99	□□□□□ -1.45
SUN1-223	ENST00000459810	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.94	□□□□□ -1.46
SUN1-223	ENST00000459810	ANAPC13	Q9BS18	74 aa		5.93	□□□□□ -1.46
SUN1-223	ENST00000459810	OBSCN	Q5VST9	7968 aa		5.88	□□□□□ -1.47
SUN1-223	ENST00000459810		H7BZZ5	65 aa		5.87	□□□□□ -1.47
SUN1-223	ENST00000459810	MT1A	P04731	61 aa		5.86	□□□□□ -1.47
SUN1-223	ENST00000459810	KRTAP6-1	Q3LI64	71 aa		5.85	□□□□□ -1.47
SUN1-223	ENST00000459810	KRTAP15-1	Q3LI76	137 aa		5.85	□□□□□ -1.47
SUN1-223	ENST00000459810	KRTAP4-2	Q9BYR5	136 aa		5.83	□□□□□ -1.48
SUN1-223	ENST00000459810	RPS28	P62857	69 aa	Known RBP	5.81	□□□□□ -1.48
SUN1-223	ENST00000459810	COX7C	P15954	63 aa		5.8	□□□□□ -1.48
SUN1-223	ENST00000459810	KRTAP25-1	Q3LHN0	102 aa		5.8	□□□□□ -1.48
SUN1-223	ENST00000459810	LCE3C	Q5T5A8	94 aa		5.79	□□□□□ -1.48
SUN1-223	ENST00000459810	CCDC179	H3BU77	68 aa		5.74	□□□□□ -1.49
SUN1-223	ENST00000459810	PRR15L	Q9BU68	103 aa		5.74	□□□□□ -1.49
SUN1-223	ENST00000459810	KRTAP6-2	Q3LI66	62 aa		5.7	□□□□□ -1.5
SUN1-223	ENST00000459810	TMEM258	P61165	79 aa		5.66	□□□□□ -1.5
SUN1-223	ENST00000459810	LINC01558	Q9Y6Z2	57 aa		5.57	□□□□□ -1.52
SUN1-223	ENST00000459810	UQCR11	O14957	56 aa		5.56	□□□□□ -1.52
SUN1-223	ENST00000459810	KRTAP5-1	Q6L8H4	278 aa		5.54	□□□□□ -1.52
SUN1-223	ENST00000459810	ATP5E	P56381	51 aa	Predicted RBP	5.51	□□□□□ -1.53
SUN1-223	ENST00000459810		V9GYY9	64 aa		5.48	□□□□□ -1.53
SUN1-223	ENST00000459810	KRTAP9-6	A8MVA2	160 aa		5.46	□□□□□ -1.54
SUN1-223	ENST00000459810	PRO0628	Q9UI54	55 aa		5.44	□□□□□ -1.54
SUN1-223	ENST00000459810	MT3	P25713	68 aa		5.42	□□□□□ -1.54
SUN1-223	ENST00000459810		K7ERS5	55 aa		5.38	□□□□□ -1.55
SUN1-223	ENST00000459810	MIR22HG	Q0VDD5	57 aa		5.35	□□□□□ -1.55
SUN1-223	ENST00000459810		Q1T7F1	81 aa		5.21	□□□□□ -1.58
SUN1-223	ENST00000459810	PRAC1	Q96KF2	57 aa		5.2	□□□□□ -1.58
SUN1-223	ENST00000459810	LCE1E	Q5T753	118 aa		5.14	□□□□□ -1.59
SUN1-223	ENST00000459810	BRK1	Q8WUW1	75 aa		5.14	□□□□□ -1.59
SUN1-223	ENST00000459810	PMAIP1	Q13794	54 aa		5.11	□□□□□ -1.59
SUN1-223	ENST00000459810	CDC42SE1	Q9NRR8	79 aa		4.99	□□□□□ -1.61
SUN1-223	ENST00000459810	PSPHP1	O15172	72 aa		4.96	□□□□□ -1.62
SUN1-223	ENST00000459810	KTN1-AS1	Q86SY8	53 aa		4.94	□□□□□ -1.62
SUN1-223	ENST00000459810	ROMO1	P60602	79 aa		4.89	□□□□□ -1.63
SUN1-223	ENST00000459810		A6NED7	52 aa		4.81	□□□□□ -1.64
SUN1-223	ENST00000459810	LCE1B	Q5T7P3	118 aa		4.81	□□□□□ -1.64
SUN1-223	ENST00000459810	LCE1C	Q5T751	118 aa		4.75	□□□□□ -1.65
SUN1-223	ENST00000459810	NDUFAF8	A1L188	74 aa		4.74	□□□□□ -1.65
SUN1-223	ENST00000459810	LCE1F	Q5T754	118 aa		4.39	□□□□□ -1.71
SUN1-223	ENST00000459810	KRTAP5-11	Q6L8G4	156 aa		4.39	□□□□□ -1.71
SUN1-223	ENST00000459810	LUZP6	Q538Z0	58 aa		4.3	□□□□□ -1.72
SUN1-223	ENST00000459810	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.25	□□□□□ -1.73
SUN1-223	ENST00000459810	PHGR1	C9JFL3	82 aa		4.18	□□□□□ -1.74
SUN1-223	ENST00000459810	LCE3D	Q9BYE3	92 aa		4.07	□□□□□ -1.76
SUN1-223	ENST00000459810	KRTAP21-2	Q3LI59	83 aa		3.88	□□□□□ -1.79
SUN1-223	ENST00000459810	LCE3E	Q5T5B0	92 aa		3.73	□□□□□ -1.81
SUN1-223	ENST00000459810	MUC19	Q7Z5P9	8384 aa		3.63	□□□□□ -1.83
SUN1-223	ENST00000459810	KRTAP4-4	Q9BYR3	166 aa		3.6	□□□□□ -1.83
SUN1-223	ENST00000459810	INE1	O15225	51 aa		3.41	□□□□□ -1.86
SUN1-223	ENST00000459810	KRTAP21-1	Q3LI58	79 aa		3.2	□□□□□ -1.9
SUN1-223	ENST00000459810	MUC16	Q8WXI7	14507 aa		2.49	□□□□□ -2.01
SUN1-223	ENST00000459810	PRM1	P04553	51 aa		2.44	□□□□□ -2.02

Retrieved 78 of 20,778 RNA–protein pairs in 104.4 ms