RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 LCE5AQ5TCM9 118 aa7.61□□□□□ -1.19
VARS-218ENST00000459667 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
VARS-218ENST00000459667 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
VARS-218ENST00000459667 MT1GP13640 62 aa7.45□□□□□ -1.22
VARS-218ENST00000459667 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
VARS-218ENST00000459667 MT1LQ93083 61 aa7.4□□□□□ -1.22
VARS-218ENST00000459667 DSTQ03001 7570 aaKnown RBP7.38□□□□□ -1.23
VARS-218ENST00000459667 MT1MQ8N339 61 aa7.33□□□□□ -1.24
VARS-218ENST00000459667 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
VARS-218ENST00000459667 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
VARS-218ENST00000459667 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
VARS-218ENST00000459667 ROMO1P60602 79 aa7.19□□□□□ -1.26
VARS-218ENST00000459667 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
VARS-218ENST00000459667 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
VARS-218ENST00000459667 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
VARS-218ENST00000459667 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
VARS-218ENST00000459667 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
VARS-218ENST00000459667 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
VARS-218ENST00000459667 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
VARS-218ENST00000459667 MT4P47944 62 aa6.89□□□□□ -1.31
VARS-218ENST00000459667 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
VARS-218ENST00000459667 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
VARS-218ENST00000459667 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
VARS-218ENST00000459667 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
VARS-218ENST00000459667 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
VARS-218ENST00000459667 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
VARS-218ENST00000459667 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
VARS-218ENST00000459667 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
VARS-218ENST00000459667 AHNAK2Q8IVF2 5795 aa6.53□□□□□ -1.36
VARS-218ENST00000459667 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
VARS-218ENST00000459667 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
VARS-218ENST00000459667 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
VARS-218ENST00000459667 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
VARS-218ENST00000459667 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
VARS-218ENST00000459667 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
VARS-218ENST00000459667 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
VARS-218ENST00000459667 MT1AP04731 61 aa6.3□□□□□ -1.4
VARS-218ENST00000459667 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
VARS-218ENST00000459667 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
VARS-218ENST00000459667 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
VARS-218ENST00000459667 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
VARS-218ENST00000459667 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
VARS-218ENST00000459667 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
VARS-218ENST00000459667 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
VARS-218ENST00000459667 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
VARS-218ENST00000459667 KTN1-AS1Q86SY8 53 aa5.91□□□□□ -1.46
VARS-218ENST00000459667 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
VARS-218ENST00000459667 MT3P25713 68 aa5.76□□□□□ -1.49
VARS-218ENST00000459667 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
VARS-218ENST00000459667 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
VARS-218ENST00000459667 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
VARS-218ENST00000459667 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
VARS-218ENST00000459667 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
VARS-218ENST00000459667 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
VARS-218ENST00000459667 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
VARS-218ENST00000459667 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
VARS-218ENST00000459667 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
VARS-218ENST00000459667 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
VARS-218ENST00000459667 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
VARS-218ENST00000459667 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
VARS-218ENST00000459667 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
VARS-218ENST00000459667 LCE1CQ5T751 118 aa4.86□□□□□ -1.63
VARS-218ENST00000459667 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
VARS-218ENST00000459667 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
VARS-218ENST00000459667 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
VARS-218ENST00000459667 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
VARS-218ENST00000459667 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
VARS-218ENST00000459667 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
VARS-218ENST00000459667 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
VARS-218ENST00000459667 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
VARS-218ENST00000459667 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
VARS-218ENST00000459667 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
VARS-218ENST00000459667 PRM1P04553 51 aa3.68□□□□□ -1.82
VARS-218ENST00000459667 INE1O15225 51 aa3.63□□□□□ -1.83
VARS-218ENST00000459667 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
VARS-218ENST00000459667 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
VARS-218ENST00000459667 H3BS24 57 aa2.69□□□□□ -1.98
VARS-218ENST00000459667 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms