RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
DDX39B-214ENST00000458640 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
DDX39B-214ENST00000458640 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
DDX39B-214ENST00000458640 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
DDX39B-214ENST00000458640 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
DDX39B-214ENST00000458640 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.78
DDX39B-214ENST00000458640 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
DDX39B-214ENST00000458640 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
DDX39B-214ENST00000458640 KMT2DO14686 5537 aa3.86□□□□□ -1.79
DDX39B-214ENST00000458640 MT1EP04732 61 aa3.83□□□□□ -1.8
DDX39B-214ENST00000458640 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
DDX39B-214ENST00000458640 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
DDX39B-214ENST00000458640 MT1LQ93083 61 aa3.77□□□□□ -1.81
DDX39B-214ENST00000458640 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
DDX39B-214ENST00000458640 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
DDX39B-214ENST00000458640 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
DDX39B-214ENST00000458640 NEBP20929 6669 aa3.7□□□□□ -1.82
DDX39B-214ENST00000458640 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
DDX39B-214ENST00000458640 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
DDX39B-214ENST00000458640 MT1GP13640 62 aa3.67□□□□□ -1.82
DDX39B-214ENST00000458640 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
DDX39B-214ENST00000458640 KRTAP5-9P26371 169 aa3.65□□□□□ -1.82
DDX39B-214ENST00000458640 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
DDX39B-214ENST00000458640 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
DDX39B-214ENST00000458640 MT1MQ8N339 61 aa3.6□□□□□ -1.83
DDX39B-214ENST00000458640 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
DDX39B-214ENST00000458640 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
DDX39B-214ENST00000458640 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
DDX39B-214ENST00000458640 SPRR2EP22531 72 aa3.52□□□□□ -1.85
DDX39B-214ENST00000458640 SPRR2BP35325 72 aa3.52□□□□□ -1.85
DDX39B-214ENST00000458640 SPRR2AP35326 72 aa3.52□□□□□ -1.85
DDX39B-214ENST00000458640 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
DDX39B-214ENST00000458640 MT3P25713 68 aa3.48□□□□□ -1.85
DDX39B-214ENST00000458640 MT1AP04731 61 aa3.46□□□□□ -1.86
DDX39B-214ENST00000458640 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
DDX39B-214ENST00000458640 SPRR2DP22532 72 aa3.4□□□□□ -1.87
DDX39B-214ENST00000458640 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
DDX39B-214ENST00000458640 PRM1P04553 51 aa3.37□□□□□ -1.87
DDX39B-214ENST00000458640 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
DDX39B-214ENST00000458640 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.88
DDX39B-214ENST00000458640 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
DDX39B-214ENST00000458640 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
DDX39B-214ENST00000458640 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
DDX39B-214ENST00000458640 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
DDX39B-214ENST00000458640 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.9
DDX39B-214ENST00000458640 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
DDX39B-214ENST00000458640 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
DDX39B-214ENST00000458640 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
DDX39B-214ENST00000458640 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
DDX39B-214ENST00000458640 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
DDX39B-214ENST00000458640 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
DDX39B-214ENST00000458640 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
DDX39B-214ENST00000458640 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
DDX39B-214ENST00000458640 MT4P47944 62 aa3□□□□□ -1.93
DDX39B-214ENST00000458640 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
DDX39B-214ENST00000458640 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
DDX39B-214ENST00000458640 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
DDX39B-214ENST00000458640 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
DDX39B-214ENST00000458640 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
DDX39B-214ENST00000458640 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
DDX39B-214ENST00000458640 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
DDX39B-214ENST00000458640 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
DDX39B-214ENST00000458640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
DDX39B-214ENST00000458640 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
DDX39B-214ENST00000458640 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
DDX39B-214ENST00000458640 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
DDX39B-214ENST00000458640 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
DDX39B-214ENST00000458640 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
DDX39B-214ENST00000458640 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
DDX39B-214ENST00000458640 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
DDX39B-214ENST00000458640 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
DDX39B-214ENST00000458640 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
DDX39B-214ENST00000458640 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
DDX39B-214ENST00000458640 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
DDX39B-214ENST00000458640 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
DDX39B-214ENST00000458640 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
DDX39B-214ENST00000458640 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms