RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
CD28-203ENST00000458610 TNP1P09430 55 aa6.09□□□□□ -1.43
CD28-203ENST00000458610 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
CD28-203ENST00000458610 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
CD28-203ENST00000458610 ROMO1P60602 79 aa6.01□□□□□ -1.45
CD28-203ENST00000458610 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
CD28-203ENST00000458610 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
CD28-203ENST00000458610 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
CD28-203ENST00000458610 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
CD28-203ENST00000458610 MT1EP04732 61 aa5.98□□□□□ -1.45
CD28-203ENST00000458610 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
CD28-203ENST00000458610 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
CD28-203ENST00000458610 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
CD28-203ENST00000458610 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
CD28-203ENST00000458610 MT1GP13640 62 aa5.85□□□□□ -1.47
CD28-203ENST00000458610 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
CD28-203ENST00000458610 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
CD28-203ENST00000458610 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
CD28-203ENST00000458610 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CD28-203ENST00000458610 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
CD28-203ENST00000458610 MT1LQ93083 61 aa5.75□□□□□ -1.49
CD28-203ENST00000458610 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
CD28-203ENST00000458610 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
CD28-203ENST00000458610 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
CD28-203ENST00000458610 MT1MQ8N339 61 aa5.68□□□□□ -1.5
CD28-203ENST00000458610 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
CD28-203ENST00000458610 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
CD28-203ENST00000458610 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
CD28-203ENST00000458610 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
CD28-203ENST00000458610 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
CD28-203ENST00000458610 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
CD28-203ENST00000458610 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
CD28-203ENST00000458610 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
CD28-203ENST00000458610 MT4P47944 62 aa5.3□□□□□ -1.56
CD28-203ENST00000458610 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
CD28-203ENST00000458610 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
CD28-203ENST00000458610 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
CD28-203ENST00000458610 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
CD28-203ENST00000458610 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
CD28-203ENST00000458610 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
CD28-203ENST00000458610 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
CD28-203ENST00000458610 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
CD28-203ENST00000458610 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CD28-203ENST00000458610 MT1AP04731 61 aa4.92□□□□□ -1.62
CD28-203ENST00000458610 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
CD28-203ENST00000458610 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
CD28-203ENST00000458610 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
CD28-203ENST00000458610 AHNAK2Q8IVF2 5795 aa4.85□□□□□ -1.63
CD28-203ENST00000458610 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
CD28-203ENST00000458610 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
CD28-203ENST00000458610 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
CD28-203ENST00000458610 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
CD28-203ENST00000458610 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
CD28-203ENST00000458610 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
CD28-203ENST00000458610 MT3P25713 68 aa4.54□□□□□ -1.68
CD28-203ENST00000458610 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
CD28-203ENST00000458610 INE1O15225 51 aa4.24□□□□□ -1.73
CD28-203ENST00000458610 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CD28-203ENST00000458610 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
CD28-203ENST00000458610 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CD28-203ENST00000458610 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
CD28-203ENST00000458610 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.77
CD28-203ENST00000458610 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
CD28-203ENST00000458610 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
CD28-203ENST00000458610 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
CD28-203ENST00000458610 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
CD28-203ENST00000458610 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CD28-203ENST00000458610 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
CD28-203ENST00000458610 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
CD28-203ENST00000458610 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CD28-203ENST00000458610 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CD28-203ENST00000458610 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
CD28-203ENST00000458610 PRM1P04553 51 aa3.06□□□□□ -1.92
CD28-203ENST00000458610 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CD28-203ENST00000458610 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CD28-203ENST00000458610 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CD28-203ENST00000458610 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 112.3 ms