RNA–Protein interactions for RNA: ENST00000458291.6

CAGE1-205, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-205ENST00000458291 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
CAGE1-205ENST00000458291 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
CAGE1-205ENST00000458291 KRTAP19-4Q3LI73 84 aa2.37□□□□□ -2.03
CAGE1-205ENST00000458291 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
CAGE1-205ENST00000458291 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.04
CAGE1-205ENST00000458291 MT1BP07438 61 aa2.32□□□□□ -2.04
CAGE1-205ENST00000458291 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
CAGE1-205ENST00000458291 KRTAP10-12P60413 245 aa2.32□□□□□ -2.04
CAGE1-205ENST00000458291 MT1XP80297 61 aa2.31□□□□□ -2.04
CAGE1-205ENST00000458291 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
CAGE1-205ENST00000458291 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
CAGE1-205ENST00000458291 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
CAGE1-205ENST00000458291 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
CAGE1-205ENST00000458291 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
CAGE1-205ENST00000458291 KMT2DO14686 5537 aa2.2□□□□□ -2.06
CAGE1-205ENST00000458291 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
CAGE1-205ENST00000458291 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
CAGE1-205ENST00000458291 NEBP20929 6669 aa2.16□□□□□ -2.06
CAGE1-205ENST00000458291 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
CAGE1-205ENST00000458291 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
CAGE1-205ENST00000458291 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
CAGE1-205ENST00000458291 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
CAGE1-205ENST00000458291 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
CAGE1-205ENST00000458291 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
CAGE1-205ENST00000458291 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
CAGE1-205ENST00000458291 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
CAGE1-205ENST00000458291 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
CAGE1-205ENST00000458291 SPRR2EP22531 72 aa2.07□□□□□ -2.08
CAGE1-205ENST00000458291 SPRR2BP35325 72 aa2.07□□□□□ -2.08
CAGE1-205ENST00000458291 SPRR2AP35326 72 aa2.07□□□□□ -2.08
CAGE1-205ENST00000458291 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
CAGE1-205ENST00000458291 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
CAGE1-205ENST00000458291 MT1EP04732 61 aa2.02□□□□□ -2.09
CAGE1-205ENST00000458291 MT1LQ93083 61 aa2.01□□□□□ -2.09
CAGE1-205ENST00000458291 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
CAGE1-205ENST00000458291 SPRR2DP22532 72 aa2□□□□□ -2.09
CAGE1-205ENST00000458291 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
CAGE1-205ENST00000458291 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
CAGE1-205ENST00000458291 MT1GP13640 62 aa1.92□□□□□ -2.1
CAGE1-205ENST00000458291 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
CAGE1-205ENST00000458291 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
CAGE1-205ENST00000458291 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.1
CAGE1-205ENST00000458291 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
CAGE1-205ENST00000458291 MT1MQ8N339 61 aa1.88□□□□□ -2.11
CAGE1-205ENST00000458291 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
CAGE1-205ENST00000458291 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
CAGE1-205ENST00000458291 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
CAGE1-205ENST00000458291 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
CAGE1-205ENST00000458291 MT4P47944 62 aa1.78□□□□□ -2.12
CAGE1-205ENST00000458291 MT1AP04731 61 aa1.75□□□□□ -2.13
CAGE1-205ENST00000458291 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
CAGE1-205ENST00000458291 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
CAGE1-205ENST00000458291 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
CAGE1-205ENST00000458291 PRM1P04553 51 aa1.69□□□□□ -2.14
CAGE1-205ENST00000458291 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
CAGE1-205ENST00000458291 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
CAGE1-205ENST00000458291 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
CAGE1-205ENST00000458291 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
CAGE1-205ENST00000458291 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
CAGE1-205ENST00000458291 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.15
CAGE1-205ENST00000458291 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
CAGE1-205ENST00000458291 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
CAGE1-205ENST00000458291 MT3P25713 68 aa1.56□□□□□ -2.16
CAGE1-205ENST00000458291 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
CAGE1-205ENST00000458291 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
CAGE1-205ENST00000458291 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
CAGE1-205ENST00000458291 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
CAGE1-205ENST00000458291 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
CAGE1-205ENST00000458291 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CAGE1-205ENST00000458291 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
CAGE1-205ENST00000458291 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
CAGE1-205ENST00000458291 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
CAGE1-205ENST00000458291 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
CAGE1-205ENST00000458291 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.24
CAGE1-205ENST00000458291 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
CAGE1-205ENST00000458291 LCE1FQ5T754 118 aa1.04□□□□□ -2.24
CAGE1-205ENST00000458291 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
CAGE1-205ENST00000458291 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 31.2 ms